Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC007395.1-201ENST00000451333 677 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 RPL36AP41-201ENST00000493820 306 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 SNRPCP2-201ENST00000504370 475 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.71□□□□□ -1.82
VAMP1P23763 MIR449C-201ENST00000516047 92 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.71□□□□□ -1.82
VAMP1P23763 AC005363.1-201ENST00000530779 351 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 RRN3P3-201ENST00000549207 578 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP1P23763 MIR4302-201ENST00000638058 60 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP1P23763 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP1P23763 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP1P23763 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP1P23763 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.71□□□□□ -1.82
VAMP1P23763 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP1P23763 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAMP1P23763 AP006437.1-201ENST00000641440 3685 ntBASIC3.71□□□□□ -1.82
VAMP1P23763 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.7□□□□□ -1.82
VAMP1P23763 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
VAMP1P23763 Y_RNA.64-201ENST00000362845 102 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 RNU6-1180P-201ENST00000364935 107 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 SNORA71.2-201ENST00000364941 134 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 RNU6-702P-201ENST00000364982 107 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 RNU6-546P-201ENST00000383991 107 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 RNU6-574P-201ENST00000384265 107 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 MIR1911-201ENST00000410783 80 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 SNORA74C-2-201ENST00000411179 201 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 AC074290.1-201ENST00000448883 135 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.7□□□□□ -1.82
VAMP1P23763 RNU7-14P-201ENST00000459331 62 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 snoU13.22-201ENST00000459428 104 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.7□□□□□ -1.82
VAMP1P23763 AC074133.1-201ENST00000515696 183 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 RNU6-344P-201ENST00000516635 111 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.7□□□□□ -1.82
VAMP1P23763 RN7SL703P-201ENST00000578485 302 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 AC078899.3-201ENST00000599065 212 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 MIR432-201ENST00000606207 94 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 AC012603.1-201ENST00000606424 528 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.7□□□□□ -1.82
VAMP1P23763 MIR1910-201ENST00000636955 80 ntBASIC3.7□□□□□ -1.82
VAMP1P23763 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.7□□□□□ -1.82
VAMP1P23763 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.7□□□□□ -1.82
VAMP1P23763 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VAMP1P23763 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
VAMP1P23763 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.69□□□□□ -1.82
VAMP1P23763 RNU6-944P-201ENST00000364023 107 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 SNORD32B-201ENST00000364460 84 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VAMP1P23763 Y_RNA.512-201ENST00000384518 102 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 RNU6-21P-201ENST00000384710 107 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VAMP1P23763 AC096920.1-201ENST00000423991 241 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 RPL23AP1-201ENST00000428990 471 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.69□□□□□ -1.82
VAMP1P23763 ABCF2P2-201ENST00000450549 296 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.69□□□□□ -1.82
VAMP1P23763 RPS29P2-201ENST00000479278 136 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 RNA5SP362-201ENST00000516048 118 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 RNU6-965P-201ENST00000516721 96 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.69□□□□□ -1.82
VAMP1P23763 AP003733.2-201ENST00000529409 171 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.69□□□□□ -1.82
VAMP1P23763 SNORD95-201ENST00000579879 68 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 MIR4503-201ENST00000582187 83 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 IPO5P1-202ENST00000600039 287 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.69□□□□□ -1.82
VAMP1P23763 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VAMP1P23763 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
VAMP1P23763 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VAMP1P23763 LINC02555-201ENST00000563933 1951 ntBASIC3.69□□□□□ -1.82
VAMP1P23763 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
VAMP1P23763 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.68□□□□□ -1.82
VAMP1P23763 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VAMP1P23763 RNU1-72P-201ENST00000362976 153 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RN7SKP15-201ENST00000364742 309 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNU6-438P-201ENST00000365561 103 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 Y_RNA.401-201ENST00000383965 117 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 Y_RNA.461-201ENST00000384263 103 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNU2-20P-201ENST00000410425 191 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNA5SP475-201ENST00000410568 110 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNU5A-5P-201ENST00000411054 116 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNA5SP306-201ENST00000411087 107 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNU6-130P-201ENST00000411112 103 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNU2-32P-201ENST00000411193 191 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.68□□□□□ -1.82
VAMP1P23763 AC012671.1-201ENST00000451912 203 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RN7SL585P-201ENST00000470538 280 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 RNU7-110P-201ENST00000516891 62 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.68□□□□□ -1.82
VAMP1P23763 AC018448.1-201ENST00000552843 316 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.68□□□□□ -1.82
VAMP1P23763 AC004817.2-201ENST00000561794 651 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.68□□□□□ -1.82
VAMP1P23763 AC005176.2-201ENST00000596933 147 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 U3.53-201ENST00000628922 216 ntBASIC3.68□□□□□ -1.82
VAMP1P23763 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms