Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RPS29P17-201ENST00000430795 166 ntBASIC4.97□□□□□ -1.61
COL9A1P20849 AL450023.3-201ENST00000440592 271 ntBASIC4.97□□□□□ -1.61
COL9A1P20849 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.97□□□□□ -1.61
COL9A1P20849 IGLVIV-65-201ENST00000517313 360 ntBASIC4.97□□□□□ -1.61
COL9A1P20849 AL049861.1-201ENST00000603130 150 ntBASIC4.97□□□□□ -1.61
COL9A1P20849 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.97□□□□□ -1.61
COL9A1P20849 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.97□□□□□ -1.61
COL9A1P20849 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL9A1P20849 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.97□□□□□ -1.61
COL9A1P20849 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
COL9A1P20849 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL9A1P20849 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.97□□□□□ -1.61
COL9A1P20849 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.96□□□□□ -1.61
COL9A1P20849 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.96□□□□□ -1.61
COL9A1P20849 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.96□□□□□ -1.62
COL9A1P20849 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
COL9A1P20849 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.96□□□□□ -1.62
COL9A1P20849 Y_RNA.124-201ENST00000363339 93 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 RNU6-271P-201ENST00000363858 105 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 Y_RNA.634-201ENST00000364811 113 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 Y_RNA.323-201ENST00000365157 109 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 DYNLT3P1-201ENST00000378574 347 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 RNU6-573P-201ENST00000383938 106 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 MIR450A2-201ENST00000385022 100 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 RNU6-440P-201ENST00000390882 105 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 RNA5SP127-201ENST00000411051 133 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.96□□□□□ -1.62
COL9A1P20849 COX6CP13-201ENST00000428703 226 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.96□□□□□ -1.62
COL9A1P20849 AL691482.1-201ENST00000453255 87 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 AC023449.1-201ENST00000454464 154 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.96□□□□□ -1.62
COL9A1P20849 RN7SKP289-201ENST00000517244 295 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.96□□□□□ -1.62
COL9A1P20849 IGKV1-22-201ENST00000524313 326 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 AC104984.5-201ENST00000586878 94 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 AC012442.3-202ENST00000636742 206 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 MIR6715B-201ENST00000637172 77 ntBASIC4.96□□□□□ -1.62
COL9A1P20849 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.96□□□□□ -1.62
COL9A1P20849 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
COL9A1P20849 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL9A1P20849 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL9A1P20849 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL9A1P20849 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL9A1P20849 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.96□□□□□ -1.62
COL9A1P20849 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
COL9A1P20849 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.96□□□□□ -1.62
COL9A1P20849 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL9A1P20849 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL9A1P20849 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL9A1P20849 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL9A1P20849 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.95□□□□□ -1.62
COL9A1P20849 Y_RNA.219-201ENST00000364232 113 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 MIR488-201ENST00000365739 83 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 SNORD116-13-201ENST00000384408 92 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 U3.32-201ENST00000408116 212 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 AL117339.2-201ENST00000430475 180 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.95□□□□□ -1.62
COL9A1P20849 AF228730.3-201ENST00000436691 102 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 RN7SL585P-201ENST00000470538 280 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 RN7SL441P-201ENST00000492388 296 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 RNU6-1146P-201ENST00000516282 102 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 RNU6-126P-201ENST00000516685 103 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.95□□□□□ -1.62
COL9A1P20849 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.95□□□□□ -1.62
COL9A1P20849 AC105245.1-201ENST00000581934 244 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.95□□□□□ -1.62
COL9A1P20849 AC005000.2-201ENST00000605468 310 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 SNORA51-201ENST00000606420 132 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 AC093732.2-201ENST00000607950 274 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.95□□□□□ -1.62
COL9A1P20849 AL022401.1-201ENST00000619498 108 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 AP005019.3-201ENST00000620418 560 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 MIR6852-201ENST00000621699 66 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 AC019206.1-201ENST00000621938 425 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 AC112484.5-201ENST00000624189 228 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL9A1P20849 Z73965.1-201ENST00000623412 2297 ntBASIC4.95□□□□□ -1.62
COL9A1P20849 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL9A1P20849 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL9A1P20849 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.95□□□□□ -1.62
COL9A1P20849 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL9A1P20849 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL9A1P20849 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.94□□□□□ -1.62
COL9A1P20849 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL9A1P20849 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL9A1P20849 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL9A1P20849 RN7SKP186-201ENST00000365371 303 ntBASIC4.94□□□□□ -1.62
COL9A1P20849 MIR1185-2-201ENST00000408687 86 ntBASIC4.94□□□□□ -1.62
COL9A1P20849 PTMAP3-201ENST00000447474 330 ntBASIC4.94□□□□□ -1.62
COL9A1P20849 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.94□□□□□ -1.62
COL9A1P20849 snoU13.14-201ENST00000459372 104 ntBASIC4.94□□□□□ -1.62
COL9A1P20849 SNORD77.4-201ENST00000516158 81 ntBASIC4.94□□□□□ -1.62
COL9A1P20849 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.94□□□□□ -1.62
COL9A1P20849 RPL17P51-201ENST00000605218 238 ntBASIC4.94□□□□□ -1.62
COL9A1P20849 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.94□□□□□ -1.62
COL9A1P20849 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL9A1P20849 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL9A1P20849 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COL9A1P20849 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 605 ms