Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AL079305.1-201ENST00000623159 3008 ntBASIC4.27□□□□□ -1.73
BMP3P12645 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
BMP3P12645 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BMP3P12645 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BMP3P12645 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BMP3P12645 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
BMP3P12645 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
BMP3P12645 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.26□□□□□ -1.73
BMP3P12645 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
BMP3P12645 SNORD9-201ENST00000362566 104 ntBASIC4.26□□□□□ -1.73
BMP3P12645 Y_RNA.217-201ENST00000364214 105 ntBASIC4.26□□□□□ -1.73
BMP3P12645 Y_RNA.245-201ENST00000364493 95 ntBASIC4.26□□□□□ -1.73
BMP3P12645 Y_RNA.262-201ENST00000364641 102 ntBASIC4.26□□□□□ -1.73
BMP3P12645 RNU6-20P-201ENST00000384106 107 ntBASIC4.26□□□□□ -1.73
BMP3P12645 RNU6-658P-201ENST00000384606 106 ntBASIC4.26□□□□□ -1.73
BMP3P12645 MIR218-2-201ENST00000385006 110 ntBASIC4.26□□□□□ -1.73
BMP3P12645 Y_RNA.597-201ENST00000410463 100 ntBASIC4.26□□□□□ -1.73
BMP3P12645 AL390729.2-201ENST00000416137 156 ntBASIC4.26□□□□□ -1.73
BMP3P12645 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.26□□□□□ -1.73
BMP3P12645 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.26□□□□□ -1.73
BMP3P12645 AC096638.1-201ENST00000444678 216 ntBASIC4.26□□□□□ -1.73
BMP3P12645 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.26□□□□□ -1.73
BMP3P12645 AC009237.7-201ENST00000447357 229 ntBASIC4.26□□□□□ -1.73
BMP3P12645 AL353705.4-201ENST00000449661 238 ntBASIC4.26□□□□□ -1.73
BMP3P12645 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.26□□□□□ -1.73
BMP3P12645 AC092798.1-201ENST00000458542 409 ntBASIC4.26□□□□□ -1.73
BMP3P12645 snoU109.2-201ENST00000459316 135 ntBASIC4.26□□□□□ -1.73
BMP3P12645 Y_RNA.641-201ENST00000459414 105 ntBASIC4.26□□□□□ -1.73
BMP3P12645 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.26□□□□□ -1.73
BMP3P12645 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.26□□□□□ -1.73
BMP3P12645 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.26□□□□□ -1.73
BMP3P12645 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.26□□□□□ -1.73
BMP3P12645 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.26□□□□□ -1.73
BMP3P12645 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BMP3P12645 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
BMP3P12645 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BMP3P12645 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
BMP3P12645 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BMP3P12645 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BMP3P12645 RNU6-1286P-201ENST00000383871 107 ntBASIC4.25□□□□□ -1.73
BMP3P12645 RNU6-449P-201ENST00000383914 107 ntBASIC4.25□□□□□ -1.73
BMP3P12645 MIR153-1-201ENST00000384914 90 ntBASIC4.25□□□□□ -1.73
BMP3P12645 MIR153-2-201ENST00000385225 87 ntBASIC4.25□□□□□ -1.73
BMP3P12645 UBA52P6-201ENST00000399822 382 ntBASIC4.25□□□□□ -1.73
BMP3P12645 AC007560.1-201ENST00000426912 237 ntBASIC4.25□□□□□ -1.73
BMP3P12645 RPL23AP83-201ENST00000434984 473 ntBASIC4.25□□□□□ -1.73
BMP3P12645 RPL23AP3-201ENST00000453844 468 ntBASIC4.25□□□□□ -1.73
BMP3P12645 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.25□□□□□ -1.73
BMP3P12645 RPS20P22-201ENST00000473700 357 ntBASIC4.25□□□□□ -1.73
BMP3P12645 RN7SL293P-201ENST00000481765 281 ntBASIC4.25□□□□□ -1.73
BMP3P12645 AF186996.7-201ENST00000492781 209 ntBASIC4.25□□□□□ -1.73
BMP3P12645 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.25□□□□□ -1.73
BMP3P12645 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.25□□□□□ -1.73
BMP3P12645 MIR5692C2-201ENST00000577959 77 ntBASIC4.25□□□□□ -1.73
BMP3P12645 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.25□□□□□ -1.73
BMP3P12645 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.25□□□□□ -1.73
BMP3P12645 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.25□□□□□ -1.73
BMP3P12645 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.25□□□□□ -1.73
BMP3P12645 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BMP3P12645 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BMP3P12645 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BMP3P12645 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.24□□□□□ -1.73
BMP3P12645 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BMP3P12645 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
BMP3P12645 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
BMP3P12645 RNU6-653P-201ENST00000363074 106 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNA5SP197-201ENST00000363357 119 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU6-961P-201ENST00000363893 105 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU6-105P-201ENST00000363909 104 ntBASIC4.24□□□□□ -1.73
BMP3P12645 Y_RNA.215-201ENST00000364204 112 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU6-215P-201ENST00000365169 102 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU6-1175P-201ENST00000365200 107 ntBASIC4.24□□□□□ -1.73
BMP3P12645 Y_RNA.333-201ENST00000365274 102 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU6-178P-201ENST00000384631 104 ntBASIC4.24□□□□□ -1.73
BMP3P12645 MIR183-201ENST00000384958 110 ntBASIC4.24□□□□□ -1.73
BMP3P12645 MIR186-201ENST00000384988 86 ntBASIC4.24□□□□□ -1.73
BMP3P12645 AL138785.1-201ENST00000425821 331 ntBASIC4.24□□□□□ -1.73
BMP3P12645 CYCSP4-201ENST00000429682 331 ntBASIC4.24□□□□□ -1.73
BMP3P12645 POLR2KP2-201ENST00000438155 177 ntBASIC4.24□□□□□ -1.73
BMP3P12645 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.24□□□□□ -1.73
BMP3P12645 SSXP4-201ENST00000451349 245 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RPL23AP49-201ENST00000492925 468 ntBASIC4.24□□□□□ -1.73
BMP3P12645 SNORA40.9-201ENST00000515895 93 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU5F-8P-201ENST00000515941 111 ntBASIC4.24□□□□□ -1.73
BMP3P12645 SCARNA15.2-201ENST00000516409 127 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.24□□□□□ -1.73
BMP3P12645 RNU6-572P-201ENST00000516724 80 ntBASIC4.24□□□□□ -1.73
BMP3P12645 AL161713.1-201ENST00000555538 145 ntBASIC4.24□□□□□ -1.73
BMP3P12645 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.24□□□□□ -1.73
BMP3P12645 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.24□□□□□ -1.73
BMP3P12645 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BMP3P12645 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.24□□□□□ -1.73
BMP3P12645 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BMP3P12645 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BMP3P12645 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.23□□□□□ -1.73
BMP3P12645 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BMP3P12645 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BMP3P12645 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
BMP3P12645 Y_RNA.230-201ENST00000364348 109 ntBASIC4.23□□□□□ -1.73
BMP3P12645 AL357139.1-201ENST00000407792 426 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms