Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.1□□□□□ -1.91
PF4V1P10720 AC010928.2-201ENST00000588017 287 ntBASIC3.1□□□□□ -1.91
PF4V1P10720 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PF4V1P10720 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.1□□□□□ -1.91
PF4V1P10720 AC012603.1-201ENST00000606424 528 ntBASIC3.1□□□□□ -1.91
PF4V1P10720 AC100812.1-201ENST00000607622 580 ntBASIC3.1□□□□□ -1.91
PF4V1P10720 MIR6075-201ENST00000620782 95 ntBASIC3.1□□□□□ -1.91
PF4V1P10720 AC022140.2-201ENST00000623500 188 ntBASIC3.1□□□□□ -1.91
PF4V1P10720 AC090517.3-201ENST00000625170 141 ntBASIC3.1□□□□□ -1.91
PF4V1P10720 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.1□□□□□ -1.91
PF4V1P10720 AL021368.2-201ENST00000606125 5352 ntBASIC3.1□□□□□ -1.91
PF4V1P10720 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PF4V1P10720 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PF4V1P10720 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.1□□□□□ -1.91
PF4V1P10720 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.09□□□□□ -1.91
PF4V1P10720 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PF4V1P10720 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.91
PF4V1P10720 AC000403.1-201ENST00000613696 3585 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PF4V1P10720 RNA5SP399-201ENST00000364003 117 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 RNU6-694P-201ENST00000364071 147 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 RNA5SP240-201ENST00000365355 128 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 Y_RNA.395-201ENST00000383945 109 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 MIR153-2-201ENST00000385225 87 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 RNA5SP171-201ENST00000391071 115 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 FO393413.1-201ENST00000402892 195 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 RN7SKP156-201ENST00000410308 342 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 HMGB3P2-201ENST00000411913 584 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.09□□□□□ -1.91
PF4V1P10720 Z82188.1-201ENST00000436709 154 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 AC099799.1-201ENST00000439809 192 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 RN7SL323P-201ENST00000494712 295 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 AC091826.1-201ENST00000514065 313 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 Y_RNA.701-201ENST00000516812 110 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 AC004584.2-201ENST00000570407 410 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.09□□□□□ -1.91
PF4V1P10720 AC006077.1-201ENST00000604746 343 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.09□□□□□ -1.91
PF4V1P10720 AC119674.1-207ENST00000641355 633 ntBASIC3.09□□□□□ -1.91
PF4V1P10720 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PF4V1P10720 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PF4V1P10720 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.08□□□□□ -1.92
PF4V1P10720 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
PF4V1P10720 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.08□□□□□ -1.92
PF4V1P10720 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PF4V1P10720 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PF4V1P10720 RNU1-18P-201ENST00000363062 164 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.08□□□□□ -1.92
PF4V1P10720 Y_RNA.405-201ENST00000383979 100 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 Y_RNA.451-201ENST00000384200 100 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 Y_RNA.463-201ENST00000384271 102 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 Y_RNA.524-201ENST00000384564 100 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 Y_RNA.561-201ENST00000384694 100 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 MIR30B-201ENST00000384850 88 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 MIR7-3-201ENST00000384898 110 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 MIR32-201ENST00000384965 70 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 MIR208B-201ENST00000401172 77 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 AL138885.1-201ENST00000405921 675 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 AL139247.1-201ENST00000422768 325 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 MTND1P14-201ENST00000427400 950 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 MTCO2P12-201ENST00000427426 682 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PF4V1P10720 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.08□□□□□ -1.92
PF4V1P10720 AP000705.1-201ENST00000454567 350 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 snoU13.6-201ENST00000458785 104 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 AC145146.1-201ENST00000496370 254 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 CKS1BP2-201ENST00000497342 240 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 PHBP14-201ENST00000512887 367 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 RNU6-1198P-201ENST00000516904 67 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 Y_RNA.706-201ENST00000516933 99 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 RN7SKP40-201ENST00000517211 242 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 RNU6-586P-201ENST00000517265 104 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.08□□□□□ -1.92
PF4V1P10720 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.08□□□□□ -1.92
PF4V1P10720 MIR4719-201ENST00000585233 84 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 AC044792.1-201ENST00000593294 196 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.08□□□□□ -1.92
PF4V1P10720 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.08□□□□□ -1.92
PF4V1P10720 PCGEM1.1-201ENST00000613431 131 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.08□□□□□ -1.92
PF4V1P10720 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.08□□□□□ -1.92
PF4V1P10720 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PF4V1P10720 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PF4V1P10720 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PF4V1P10720 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.08□□□□□ -1.92
PF4V1P10720 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
PF4V1P10720 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.07□□□□□ -1.92
PF4V1P10720 AC006504.1-201ENST00000562493 3666 ntBASIC3.07□□□□□ -1.92
PF4V1P10720 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PF4V1P10720 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PF4V1P10720 U3.9-201ENST00000363823 204 ntBASIC3.07□□□□□ -1.92
PF4V1P10720 RNU6-99P-201ENST00000364721 107 ntBASIC3.07□□□□□ -1.92
PF4V1P10720 RNU6-17P-201ENST00000384245 107 ntBASIC3.07□□□□□ -1.92
PF4V1P10720 RNU6-18P-201ENST00000384527 107 ntBASIC3.07□□□□□ -1.92
PF4V1P10720 MIR95-201ENST00000385072 81 ntBASIC3.07□□□□□ -1.92
PF4V1P10720 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PF4V1P10720 RNU2-63P-201ENST00000410792 194 ntBASIC3.07□□□□□ -1.92
PF4V1P10720 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.07□□□□□ -1.92
PF4V1P10720 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms