Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.86□□□□□ -1.79
APPP05067 AC136443.5-201ENST00000603741 370 ntBASIC3.86□□□□□ -1.79
APPP05067 AP001836.1-201ENST00000604675 523 ntBASIC3.86□□□□□ -1.79
APPP05067 AC073308.1-201ENST00000623696 305 ntBASIC3.86□□□□□ -1.79
APPP05067 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.86□□□□□ -1.79
APPP05067 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.86□□□□□ -1.79
APPP05067 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
APPP05067 CUL1P1-201ENST00000509510 2425 ntBASIC3.86□□□□□ -1.79
APPP05067 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.86□□□□□ -1.79
APPP05067 RNU6-105P-201ENST00000363909 104 ntBASIC3.85□□□□□ -1.79
APPP05067 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.85□□□□□ -1.79
APPP05067 RNU6-1106P-201ENST00000390845 107 ntBASIC3.85□□□□□ -1.79
APPP05067 MIR888-201ENST00000401186 77 ntBASIC3.85□□□□□ -1.79
APPP05067 RNA5SP293-201ENST00000410527 113 ntBASIC3.85□□□□□ -1.79
APPP05067 RNA5SP38-201ENST00000410750 119 ntBASIC3.85□□□□□ -1.79
APPP05067 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.85□□□□□ -1.79
APPP05067 RPL26P27-201ENST00000414397 437 ntBASIC3.85□□□□□ -1.79
APPP05067 AC104332.2-201ENST00000429959 156 ntBASIC3.85□□□□□ -1.79
APPP05067 RPS15AP10-201ENST00000432472 382 ntBASIC3.85□□□□□ -1.79
APPP05067 AC011816.1-201ENST00000441346 546 ntBASIC3.85□□□□□ -1.79
APPP05067 RPS3AP12-201ENST00000443616 753 ntBASIC3.85□□□□□ -1.79
APPP05067 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.85□□□□□ -1.79
APPP05067 RPL26P9-201ENST00000457466 433 ntBASIC3.85□□□□□ -1.79
APPP05067 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.85□□□□□ -1.79
APPP05067 AC021205.2-201ENST00000480069 347 ntBASIC3.85□□□□□ -1.79
APPP05067 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.85□□□□□ -1.79
APPP05067 MIR5195-201ENST00000583555 115 ntBASIC3.85□□□□□ -1.79
APPP05067 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.85□□□□□ -1.79
APPP05067 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.85□□□□□ -1.79
APPP05067 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.85□□□□□ -1.79
APPP05067 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.85□□□□□ -1.79
APPP05067 AC241585.2-209ENST00000638217 143 ntBASIC3.85□□□□□ -1.79
APPP05067 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APPP05067 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
APPP05067 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
APPP05067 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
APPP05067 Y_RNA.123-201ENST00000363338 102 ntBASIC3.84□□□□□ -1.79
APPP05067 AP002088.1-201ENST00000382740 395 ntBASIC3.84□□□□□ -1.79
APPP05067 SNORD116-20-201ENST00000384529 92 ntBASIC3.84□□□□□ -1.79
APPP05067 SNORA41-201ENST00000384675 132 ntBASIC3.84□□□□□ -1.79
APPP05067 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
APPP05067 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.84□□□□□ -1.79
APPP05067 BPY2DP-201ENST00000422208 265 ntBASIC3.84□□□□□ -1.79
APPP05067 NUP35P1-201ENST00000422734 947 ntBASIC3.84□□□□□ -1.79
APPP05067 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.84□□□□□ -1.79
APPP05067 AL353752.1-201ENST00000454946 260 ntBASIC3.84□□□□□ -1.79
APPP05067 HMGN1P18-201ENST00000457642 277 ntBASIC3.84□□□□□ -1.79
APPP05067 AC133134.1-201ENST00000466800 359 ntBASIC3.84□□□□□ -1.79
APPP05067 RNU4-77P-201ENST00000516692 156 ntBASIC3.84□□□□□ -1.79
APPP05067 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.84□□□□□ -1.79
APPP05067 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.84□□□□□ -1.79
APPP05067 AC011602.1-201ENST00000546484 331 ntBASIC3.84□□□□□ -1.79
APPP05067 MIR2682-201ENST00000580305 110 ntBASIC3.84□□□□□ -1.79
APPP05067 MIR3609-201ENST00000582661 80 ntBASIC3.84□□□□□ -1.79
APPP05067 AC104695.3-201ENST00000604052 296 ntBASIC3.84□□□□□ -1.79
APPP05067 AC004852.3-201ENST00000614131 326 ntBASIC3.84□□□□□ -1.79
APPP05067 MIR6134-201ENST00000617606 109 ntBASIC3.84□□□□□ -1.79
APPP05067 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.84□□□□□ -1.79
APPP05067 AC091903.1-201ENST00000624322 454 ntBASIC3.84□□□□□ -1.79
APPP05067 MIR3651-201ENST00000630427 90 ntBASIC3.84□□□□□ -1.79
APPP05067 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.83□□□□□ -1.8
APPP05067 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APPP05067 RNU6-874P-201ENST00000362390 105 ntBASIC3.83□□□□□ -1.8
APPP05067 RNY1P16-201ENST00000363063 111 ntBASIC3.83□□□□□ -1.8
APPP05067 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.83□□□□□ -1.8
APPP05067 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
APPP05067 RNA5SP229-201ENST00000410809 99 ntBASIC3.83□□□□□ -1.8
APPP05067 RNU4-47P-201ENST00000410876 114 ntBASIC3.83□□□□□ -1.8
APPP05067 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.83□□□□□ -1.8
APPP05067 MTCO3P29-201ENST00000432119 779 ntBASIC3.83□□□□□ -1.8
APPP05067 RPL23AP83-201ENST00000434984 473 ntBASIC3.83□□□□□ -1.8
APPP05067 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.83□□□□□ -1.8
APPP05067 AL590664.1-201ENST00000448065 339 ntBASIC3.83□□□□□ -1.8
APPP05067 RPL37P4-201ENST00000448908 268 ntBASIC3.83□□□□□ -1.8
APPP05067 AC079354.2-201ENST00000453523 154 ntBASIC3.83□□□□□ -1.8
APPP05067 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.83□□□□□ -1.8
APPP05067 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.83□□□□□ -1.8
APPP05067 RNU7-169P-201ENST00000459456 61 ntBASIC3.83□□□□□ -1.8
APPP05067 AC010401.1-201ENST00000463867 348 ntBASIC3.83□□□□□ -1.8
APPP05067 RPL30P14-201ENST00000482744 348 ntBASIC3.83□□□□□ -1.8
APPP05067 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.83□□□□□ -1.8
APPP05067 SNORA31.18-201ENST00000517043 134 ntBASIC3.83□□□□□ -1.8
APPP05067 RNU6-711P-201ENST00000517255 106 ntBASIC3.83□□□□□ -1.8
APPP05067 MRPS36P4-201ENST00000534436 298 ntBASIC3.83□□□□□ -1.8
APPP05067 AC078899.3-201ENST00000599065 212 ntBASIC3.83□□□□□ -1.8
APPP05067 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.83□□□□□ -1.8
APPP05067 AL355598.1-201ENST00000604169 202 ntBASIC3.83□□□□□ -1.8
APPP05067 AL161756.2-201ENST00000604597 246 ntBASIC3.83□□□□□ -1.8
APPP05067 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APPP05067 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APPP05067 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
APPP05067 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
APPP05067 SNORD56.1-201ENST00000362913 68 ntBASIC3.82□□□□□ -1.8
APPP05067 RNU6-527P-201ENST00000363425 104 ntBASIC3.82□□□□□ -1.8
APPP05067 Y_RNA.145-201ENST00000363527 102 ntBASIC3.82□□□□□ -1.8
APPP05067 RNU1-140P-201ENST00000365040 165 ntBASIC3.82□□□□□ -1.8
APPP05067 Y_RNA.314-201ENST00000365114 102 ntBASIC3.82□□□□□ -1.8
APPP05067 U8.9-201ENST00000365667 134 ntBASIC3.82□□□□□ -1.8
APPP05067 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
APPP05067 RPS29P13-201ENST00000402041 169 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms