Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TRAV32-201ENST00000553993 340 ntBASIC1.02□□□□□ -2.25
APOEP02649 MTND5P35-201ENST00000557537 1720 ntBASIC1.02□□□□□ -2.25
APOEP02649 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.02□□□□□ -2.25
APOEP02649 BCRP9-201ENST00000605312 388 ntBASIC1.02□□□□□ -2.25
APOEP02649 AL355802.3-201ENST00000607571 545 ntBASIC1.02□□□□□ -2.25
APOEP02649 AL159153.1-201ENST00000619688 317 ntBASIC1.02□□□□□ -2.25
APOEP02649 LINC02555-201ENST00000563933 1951 ntBASIC1.01□□□□□ -2.25
APOEP02649 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.01□□□□□ -2.25
APOEP02649 SNORA25.9-201ENST00000365087 128 ntBASIC1.01□□□□□ -2.25
APOEP02649 RNY3P13-201ENST00000365542 102 ntBASIC1.01□□□□□ -2.25
APOEP02649 RPL23AP32-201ENST00000395315 459 ntBASIC1.01□□□□□ -2.25
APOEP02649 PIGPP2-201ENST00000411569 458 ntBASIC1.01□□□□□ -2.25
APOEP02649 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.01□□□□□ -2.25
APOEP02649 RPL21P90-201ENST00000415692 466 ntBASIC1.01□□□□□ -2.25
APOEP02649 AC139712.2-201ENST00000424302 339 ntBASIC1.01□□□□□ -2.25
APOEP02649 AL589872.1-201ENST00000426602 288 ntBASIC1.01□□□□□ -2.25
APOEP02649 AL627311.1-201ENST00000431514 115 ntBASIC1.01□□□□□ -2.25
APOEP02649 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.01□□□□□ -2.25
APOEP02649 USP9YP17-201ENST00000444617 696 ntBASIC1.01□□□□□ -2.25
APOEP02649 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.01□□□□□ -2.25
APOEP02649 Y_RNA.687-201ENST00000516558 91 ntBASIC1.01□□□□□ -2.25
APOEP02649 Y_RNA.689-201ENST00000516589 107 ntBASIC1.01□□□□□ -2.25
APOEP02649 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.01□□□□□ -2.25
APOEP02649 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.01□□□□□ -2.25
APOEP02649 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.01□□□□□ -2.25
APOEP02649 MIR3937-201ENST00000580135 106 ntBASIC1.01□□□□□ -2.25
APOEP02649 MIR544B-201ENST00000582372 78 ntBASIC1.01□□□□□ -2.25
APOEP02649 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.01□□□□□ -2.25
APOEP02649 AC007792.1-201ENST00000623023 402 ntBASIC1.01□□□□□ -2.25
APOEP02649 MIR412-201ENST00000362142 91 ntBASIC1□□□□□ -2.25
APOEP02649 SNORD56.1-201ENST00000362913 68 ntBASIC1□□□□□ -2.25
APOEP02649 RNU6-946P-201ENST00000383878 107 ntBASIC1□□□□□ -2.25
APOEP02649 RNU6-26P-201ENST00000383985 107 ntBASIC1□□□□□ -2.25
APOEP02649 RNU6-190P-201ENST00000384154 102 ntBASIC1□□□□□ -2.25
APOEP02649 RNU6-769P-201ENST00000384407 104 ntBASIC1□□□□□ -2.25
APOEP02649 MIR548B-201ENST00000385247 97 ntBASIC1□□□□□ -2.25
APOEP02649 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
APOEP02649 HSPE1P9-201ENST00000440046 311 ntBASIC1□□□□□ -2.25
APOEP02649 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
APOEP02649 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1□□□□□ -2.25
APOEP02649 AC097473.1-201ENST00000508142 408 ntBASIC1□□□□□ -2.25
APOEP02649 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1□□□□□ -2.25
APOEP02649 AC008015.1-201ENST00000555505 465 ntBASIC1□□□□□ -2.25
APOEP02649 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1□□□□□ -2.25
APOEP02649 CYP3A52P-201ENST00000563326 91 ntBASIC1□□□□□ -2.25
APOEP02649 AC009712.1-201ENST00000564938 316 ntBASIC1□□□□□ -2.25
APOEP02649 KC877982.1-201ENST00000602313 470 ntBASIC1□□□□□ -2.25
APOEP02649 AL022154.1-201ENST00000604698 785 ntBASIC1□□□□□ -2.25
APOEP02649 AP000654.2-201ENST00000605633 586 ntBASIC1□□□□□ -2.25
APOEP02649 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1□□□□□ -2.25
APOEP02649 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
APOEP02649 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
APOEP02649 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
APOEP02649 Y_RNA.192-201ENST00000363977 102 ntBASIC0.99□□□□□ -2.25
APOEP02649 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.99□□□□□ -2.25
APOEP02649 RNU6-413P-201ENST00000384115 107 ntBASIC0.99□□□□□ -2.25
APOEP02649 RNU6-1222P-201ENST00000384615 107 ntBASIC0.99□□□□□ -2.25
APOEP02649 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
APOEP02649 MRPL35P1-201ENST00000404272 572 ntBASIC0.99□□□□□ -2.25
APOEP02649 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
APOEP02649 TAF9P1-201ENST00000445421 515 ntBASIC0.99□□□□□ -2.25
APOEP02649 RPS27P1-201ENST00000450552 247 ntBASIC0.99□□□□□ -2.25
APOEP02649 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.99□□□□□ -2.25
APOEP02649 OR2AQ1P-201ENST00000451972 200 ntBASIC0.99□□□□□ -2.25
APOEP02649 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.99□□□□□ -2.25
APOEP02649 TAF9P2-201ENST00000454958 515 ntBASIC0.99□□□□□ -2.25
APOEP02649 AL122001.1-201ENST00000457027 370 ntBASIC0.99□□□□□ -2.25
APOEP02649 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.99□□□□□ -2.25
APOEP02649 ARL2BPP4-201ENST00000506854 471 ntBASIC0.99□□□□□ -2.25
APOEP02649 AC112206.3-201ENST00000514578 389 ntBASIC0.99□□□□□ -2.25
APOEP02649 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
APOEP02649 SNORA43.2-201ENST00000516652 128 ntBASIC0.99□□□□□ -2.25
APOEP02649 RNU6-1092P-201ENST00000516955 87 ntBASIC0.99□□□□□ -2.25
APOEP02649 RNA5SP490-201ENST00000517141 136 ntBASIC0.99□□□□□ -2.25
APOEP02649 AC091163.3-201ENST00000518269 1144 ntBASIC0.99□□□□□ -2.25
APOEP02649 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.99□□□□□ -2.25
APOEP02649 BNIP3P6-201ENST00000549284 499 ntBASIC0.99□□□□□ -2.25
APOEP02649 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
APOEP02649 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
APOEP02649 RNU6-511P-201ENST00000363496 107 ntBASIC0.98□□□□□ -2.25
APOEP02649 RNU5E-6P-201ENST00000365574 115 ntBASIC0.98□□□□□ -2.25
APOEP02649 RNU6-298P-201ENST00000390888 96 ntBASIC0.98□□□□□ -2.25
APOEP02649 AL357139.1-201ENST00000407792 426 ntBASIC0.98□□□□□ -2.25
APOEP02649 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.98□□□□□ -2.25
APOEP02649 TXNL1P1-201ENST00000429528 554 ntBASIC0.98□□□□□ -2.25
APOEP02649 C8orf59P1-201ENST00000429930 303 ntBASIC0.98□□□□□ -2.25
APOEP02649 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.98□□□□□ -2.25
APOEP02649 RNU6-333P-201ENST00000459117 107 ntBASIC0.98□□□□□ -2.25
APOEP02649 RNA5SP216-201ENST00000516111 123 ntBASIC0.98□□□□□ -2.25
APOEP02649 RNU6-113P-201ENST00000516653 101 ntBASIC0.98□□□□□ -2.25
APOEP02649 SNORA31.16-201ENST00000516773 139 ntBASIC0.98□□□□□ -2.25
APOEP02649 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.98□□□□□ -2.25
APOEP02649 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.98□□□□□ -2.25
APOEP02649 CENPUP1-201ENST00000526649 1202 ntBASIC0.98□□□□□ -2.25
APOEP02649 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.98□□□□□ -2.25
APOEP02649 NIFKP6-201ENST00000598115 845 ntBASIC0.98□□□□□ -2.25
APOEP02649 AC091965.4-201ENST00000607691 587 ntBASIC0.98□□□□□ -2.25
APOEP02649 AC006386.1-201ENST00000619436 415 ntBASIC0.98□□□□□ -2.25
APOEP02649 AP000943.4-201ENST00000622912 357 ntBASIC0.98□□□□□ -2.25
APOEP02649 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms