Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.06□□□□□ -2.24
COL4A1P02462 AL590365.1-201ENST00000450788 243 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A1P02462 AL441985.1-201ENST00000457727 251 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.06□□□□□ -2.24
COL4A1P02462 AL139824.2-201ENST00000458731 1095 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 RNU7-125P-201ENST00000458760 62 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A1P02462 SNORA31.6-201ENST00000516241 130 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.06□□□□□ -2.24
COL4A1P02462 AP005902.1-201ENST00000521358 186 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 AP003181.2-201ENST00000528941 181 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 AC010186.2-204ENST00000537668 439 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL4A1P02462 AL359212.1-201ENST00000556608 614 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 MIR5697-201ENST00000578045 78 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 U6.42-201ENST00000618440 107 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 MTND4P4-201ENST00000439033 1366 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL4A1P02462 RNU5A-8P-201ENST00000364102 114 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 RNU6-166P-201ENST00000384371 107 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 RNU6-658P-201ENST00000384606 106 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC098592.1-201ENST00000419352 333 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.05□□□□□ -2.24
COL4A1P02462 RPL23AP30-201ENST00000432419 501 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC010153.1-201ENST00000432862 727 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AL008629.1-201ENST00000438615 184 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 UBE2D3P4-201ENST00000441973 436 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC112771.1-201ENST00000463581 102 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AF213884.2-201ENST00000510417 903 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.05□□□□□ -2.24
COL4A1P02462 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.05□□□□□ -2.24
COL4A1P02462 SNORA25.11-201ENST00000515935 105 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 RNA5SP330-201ENST00000517096 96 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.05□□□□□ -2.24
COL4A1P02462 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.05□□□□□ -2.24
COL4A1P02462 AC234772.3-201ENST00000602277 528 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 MTCYBP22-201ENST00000603788 447 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC103810.8-201ENST00000607347 118 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC091965.4-201ENST00000607691 587 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC027449.1-201ENST00000608890 407 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 AC007671.2-201ENST00000637344 619 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 U6.99-201ENST00000637524 83 ntBASIC1.05□□□□□ -2.24
COL4A1P02462 RNU4-1-201ENST00000363925 141 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 SNORA16B-201ENST00000364674 135 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-716P-201ENST00000365621 103 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 MIR676-201ENST00000390702 67 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RNU2-49P-201ENST00000410666 184 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A1P02462 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.04□□□□□ -2.24
COL4A1P02462 AC097463.2-201ENST00000421074 142 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 MTCO3P46-201ENST00000425787 232 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A1P02462 FTH1P12-201ENST00000432137 551 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL591212.2-201ENST00000433923 257 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-953P-201ENST00000459154 107 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC087884.1-201ENST00000469738 328 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COL4A1P02462 AC116655.1-201ENST00000508324 901 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RN7SKP179-201ENST00000516126 217 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-1092P-201ENST00000516955 87 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 ADI1P3-201ENST00000549509 470 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 HSPE1P4-201ENST00000550617 308 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 MRPS36P5-201ENST00000551909 298 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A1P02462 DPPA3P3-201ENST00000603842 430 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC087045.1-201ENST00000605856 382 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 MIR5739-201ENST00000619803 80 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC092192.1-201ENST00000633154 1018 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-500P-201ENST00000362349 107 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-511P-201ENST00000363496 107 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-501P-201ENST00000364072 100 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RNU6-660P-201ENST00000364566 109 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 SNORA72.3-201ENST00000365074 132 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
COL4A1P02462 MIR561-201ENST00000385216 97 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 U8.14-201ENST00000390843 143 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RN7SKP158-201ENST00000410453 326 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.04□□□□□ -2.24
COL4A1P02462 VN1R36P-201ENST00000414936 291 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.04□□□□□ -2.24
COL4A1P02462 EIF4EP4-201ENST00000424916 578 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RPL7P34-201ENST00000433316 712 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.04□□□□□ -2.24
COL4A1P02462 AL161788.1-201ENST00000441805 169 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AL033528.1-201ENST00000453780 140 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC005908.1-201ENST00000468701 347 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RPL7P43-201ENST00000478876 753 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 RPL22P13-201ENST00000493291 347 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC010587.1-201ENST00000505809 469 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC105313.1-201ENST00000509121 353 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COL4A1P02462 AC098591.2-201ENST00000510152 315 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC118273.2-201ENST00000532092 465 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.04□□□□□ -2.24
COL4A1P02462 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms