Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL031667.3-201ENST00000620124 655 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 RNU6-480P-201ENST00000384332 107 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 MIR218-1-201ENST00000384999 110 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 MIR610-201ENST00000385139 96 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC244098.3-201ENST00000424803 96 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 DEFB130D-201ENST00000426866 237 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.15□□□□□ -2.43
USH2AO75445 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.15□□□□□ -2.43
USH2AO75445 RAB11AP2-201ENST00000545905 639 ntBASIC-0.15□□□□□ -2.43
USH2AO75445 AC005832.2-201ENST00000538921 1430 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 RNU6-269P-201ENST00000391077 97 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 PNRC2P1-201ENST00000423940 420 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.16□□□□□ -2.43
USH2AO75445 AC018868.1-201ENST00000491307 315 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.16□□□□□ -2.43
USH2AO75445 AC084024.2-201ENST00000503480 791 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 AC004923.2-201ENST00000529649 369 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.16□□□□□ -2.43
USH2AO75445 AC008088.1-201ENST00000580993 280 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.16□□□□□ -2.43
USH2AO75445 AC107982.1-201ENST00000507171 1300 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 RNY1P8-201ENST00000383970 114 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 RNU6-880P-201ENST00000384526 107 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 MED13P1-201ENST00000428342 171 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 RN7SKP34-201ENST00000516142 244 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 RNU6-118P-201ENST00000516552 102 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.16□□□□□ -2.43
USH2AO75445 AC022432.1-201ENST00000595739 310 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 AC068276.1-201ENST00000605793 379 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 uc_338.19-201ENST00000616808 99 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 AL603758.1-201ENST00000618654 241 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 AL603839.4-201ENST00000624658 1005 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 AC005592.1-201ENST00000566527 1640 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.16□□□□□ -2.43
USH2AO75445 CBX3P9-201ENST00000402326 552 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC092423.1-201ENST00000430165 186 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 MTND1P20-201ENST00000430341 950 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.16□□□□□ -2.44
USH2AO75445 RNU6-274P-201ENST00000459566 107 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC015908.1-201ENST00000478739 476 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC010615.3-201ENST00000597319 394 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 MIR3529-201ENST00000637713 78 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 SNORD114-24-201ENST00000365029 72 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 SEPT7P5-201ENST00000434048 306 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.16□□□□□ -2.44
USH2AO75445 SEPT7P4-201ENST00000437076 306 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 FABP5P4-201ENST00000437203 171 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.16□□□□□ -2.44
USH2AO75445 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.16□□□□□ -2.44
USH2AO75445 SNORD4A-201ENST00000459174 72 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC104164.3-201ENST00000467363 1258 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 RPL30P7-201ENST00000479312 323 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.16□□□□□ -2.44
USH2AO75445 HMGB1P22-201ENST00000505315 124 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC107027.2-201ENST00000512197 115 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.16□□□□□ -2.44
USH2AO75445 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.16□□□□□ -2.44
USH2AO75445 BPTFP1-201ENST00000579209 492 ntBASIC-0.16□□□□□ -2.44
USH2AO75445 SNORD114-11-201ENST00000363738 75 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 SNORA4.1-201ENST00000364263 144 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 FCF1P4-201ENST00000448326 183 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 AC105758.1-201ENST00000506038 399 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 RNU5F-8P-201ENST00000515941 111 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 NRON-201ENST00000517270 370 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.17□□□□□ -2.44
USH2AO75445 MIR3167-201ENST00000579623 85 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC005176.2-201ENST00000596933 147 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
USH2AO75445 AL359854.1-201ENST00000614203 1594 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC016716.1-201ENST00000265882 708 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
USH2AO75445 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.17□□□□□ -2.44
USH2AO75445 BX248409.1-201ENST00000455497 255 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 RNA5SP137-201ENST00000516833 135 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC067904.2-201ENST00000517322 1283 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC134698.4-201ENST00000523451 826 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 AC012435.1-202ENST00000568772 240 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AL359314.1-201ENST00000616913 261 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC092268.1-201ENST00000342691 405 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 HMGN2P39-201ENST00000398005 273 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AL356320.2-201ENST00000417263 507 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 MLLT10P1-201ENST00000418346 262 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 NCOR1P3-201ENST00000420479 303 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AL953862.1-201ENST00000423016 168 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 AC233266.1-201ENST00000454518 96 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms