Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU6-622P-201ENST00000384272 103 ntBASIC5.07□□□□□ -1.6
RNF40O75150 MIR298-201ENST00000401212 88 ntBASIC5.07□□□□□ -1.6
RNF40O75150 RNA5SP504-201ENST00000410676 117 ntBASIC5.07□□□□□ -1.6
RNF40O75150 RNU6-383P-201ENST00000410864 94 ntBASIC5.07□□□□□ -1.6
RNF40O75150 AC004866.1-201ENST00000411748 78 ntBASIC5.07□□□□□ -1.6
RNF40O75150 AC244098.2-201ENST00000422068 99 ntBASIC5.07□□□□□ -1.6
RNF40O75150 AC019205.3-201ENST00000424573 156 ntBASIC5.07□□□□□ -1.6
RNF40O75150 AL353748.1-201ENST00000440753 474 ntBASIC5.07□□□□□ -1.6
RNF40O75150 RN7SL517P-201ENST00000462240 305 ntBASIC5.07□□□□□ -1.6
RNF40O75150 AC010285.1-201ENST00000470580 392 ntBASIC5.07□□□□□ -1.6
RNF40O75150 RPS26P45-201ENST00000471748 340 ntBASIC5.07□□□□□ -1.6
RNF40O75150 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF40O75150 RNU6-638P-201ENST00000516582 104 ntBASIC5.07□□□□□ -1.6
RNF40O75150 CYP4A27P-201ENST00000567218 190 ntBASIC5.07□□□□□ -1.6
RNF40O75150 MIR378D2-201ENST00000580636 98 ntBASIC5.07□□□□□ -1.6
RNF40O75150 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF40O75150 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.07□□□□□ -1.6
RNF40O75150 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF40O75150 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
RNF40O75150 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF40O75150 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF40O75150 MAPK10-303ENST00000641324 3959 ntBASIC5.06□□□□□ -1.6
RNF40O75150 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF40O75150 RN7SKP224-201ENST00000364140 325 ntBASIC5.06□□□□□ -1.6
RNF40O75150 RNU6-294P-201ENST00000364999 102 ntBASIC5.06□□□□□ -1.6
RNF40O75150 RNU6-217P-201ENST00000384164 104 ntBASIC5.06□□□□□ -1.6
RNF40O75150 SNORA70.10-201ENST00000384515 134 ntBASIC5.06□□□□□ -1.6
RNF40O75150 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF40O75150 AC004386.2-201ENST00000441858 148 ntBASIC5.06□□□□□ -1.6
RNF40O75150 AC090525.1-201ENST00000479116 478 ntBASIC5.06□□□□□ -1.6
RNF40O75150 RNU6-781P-201ENST00000516377 101 ntBASIC5.06□□□□□ -1.6
RNF40O75150 AP003327.1-201ENST00000529684 127 ntBASIC5.06□□□□□ -1.6
RNF40O75150 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF40O75150 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF40O75150 AC090897.2-201ENST00000581715 130 ntBASIC5.06□□□□□ -1.6
RNF40O75150 MIR5096-201ENST00000583713 70 ntBASIC5.06□□□□□ -1.6
RNF40O75150 SNRPGP20-201ENST00000604477 205 ntBASIC5.06□□□□□ -1.6
RNF40O75150 AC012468.1-201ENST00000604888 430 ntBASIC5.06□□□□□ -1.6
RNF40O75150 AC015813.4-201ENST00000610469 179 ntBASIC5.06□□□□□ -1.6
RNF40O75150 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF40O75150 AL121890.5-201ENST00000620848 304 ntBASIC5.06□□□□□ -1.6
RNF40O75150 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF40O75150 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF40O75150 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF40O75150 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF40O75150 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF40O75150 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF40O75150 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF40O75150 SNORD114-19-201ENST00000363072 75 ntBASIC5.05□□□□□ -1.6
RNF40O75150 RNU6-554P-201ENST00000410466 106 ntBASIC5.05□□□□□ -1.6
RNF40O75150 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF40O75150 TOMM22P1-201ENST00000418578 312 ntBASIC5.05□□□□□ -1.6
RNF40O75150 snoU13.1-201ENST00000459157 104 ntBASIC5.05□□□□□ -1.6
RNF40O75150 RN7SL558P-201ENST00000497468 299 ntBASIC5.05□□□□□ -1.6
RNF40O75150 AC107918.3-201ENST00000533272 382 ntBASIC5.05□□□□□ -1.6
RNF40O75150 MIR4284-201ENST00000578924 81 ntBASIC5.05□□□□□ -1.6
RNF40O75150 AC011471.1-201ENST00000585766 187 ntBASIC5.05□□□□□ -1.6
RNF40O75150 RNA5SP108-201ENST00000605921 117 ntBASIC5.05□□□□□ -1.6
RNF40O75150 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF40O75150 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RNF40O75150 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF40O75150 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF40O75150 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF40O75150 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF40O75150 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF40O75150 U1.1-201ENST00000384101 164 ntBASIC5.04□□□□□ -1.6
RNF40O75150 RPL18P10-201ENST00000425606 538 ntBASIC5.04□□□□□ -1.6
RNF40O75150 RPS29P9-201ENST00000440360 171 ntBASIC5.04□□□□□ -1.6
RNF40O75150 RNU6-107P-201ENST00000516643 102 ntBASIC5.04□□□□□ -1.6
RNF40O75150 RPL30P11-203ENST00000598995 310 ntBASIC5.04□□□□□ -1.6
RNF40O75150 AC025031.4-201ENST00000621248 3271 ntBASIC5.04□□□□□ -1.6
RNF40O75150 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF40O75150 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF40O75150 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF40O75150 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF40O75150 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF40O75150 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RNF40O75150 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF40O75150 AC087190.4-201ENST00000574616 8334 ntBASIC5.03□□□□□ -1.6
RNF40O75150 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF40O75150 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF40O75150 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RNF40O75150 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF40O75150 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
RNF40O75150 RNU6-335P-201ENST00000364563 113 ntBASIC5.03□□□□□ -1.6
RNF40O75150 MIR548A1-201ENST00000385041 97 ntBASIC5.03□□□□□ -1.6
RNF40O75150 U3.26-201ENST00000391236 204 ntBASIC5.03□□□□□ -1.6
RNF40O75150 MIR320B2-201ENST00000408479 138 ntBASIC5.03□□□□□ -1.6
RNF40O75150 BX510359.2-201ENST00000417920 305 ntBASIC5.03□□□□□ -1.6
RNF40O75150 RPL37P4-201ENST00000448908 268 ntBASIC5.03□□□□□ -1.6
RNF40O75150 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF40O75150 RN7SL41P-201ENST00000476144 297 ntBASIC5.03□□□□□ -1.6
RNF40O75150 RNU6-344P-201ENST00000516635 111 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms