Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MIR518C-201ENST00000384822 101 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 MIR514A1-201ENST00000385133 98 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
GFRA3O60609 FTH1P15-201ENST00000406984 280 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA3O60609 AL139281.1-201ENST00000422120 335 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 AC244670.1-201ENST00000436879 112 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.63□□□□□ -1.67
GFRA3O60609 AL162151.2-201ENST00000448875 158 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 RPL39P25-201ENST00000449384 154 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 AL645939.1-201ENST00000453429 797 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 PPIAP15-201ENST00000479662 484 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 PPP1R11P1-201ENST00000486095 376 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 RNU6-795P-201ENST00000516323 103 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 RNU6-1006P-201ENST00000516998 103 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 AC018442.3-201ENST00000523025 183 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA3O60609 CYCSP39-201ENST00000565821 309 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 MIR5699-201ENST00000578903 90 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 AC105245.1-201ENST00000581934 244 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 AC133552.1-201ENST00000569988 4007 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA3O60609 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.63□□□□□ -1.67
GFRA3O60609 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
GFRA3O60609 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.62□□□□□ -1.67
GFRA3O60609 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
GFRA3O60609 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 MIR133A2-201ENST00000347538 102 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 Y_RNA.316-201ENST00000365118 111 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 Z98749.2-208ENST00000381646 500 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 MIR548D2-201ENST00000384955 97 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 RNU1-82P-201ENST00000390851 165 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 RNU6-938P-201ENST00000411285 103 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.62□□□□□ -1.67
GFRA3O60609 NDUFS5P3-201ENST00000450668 321 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 AC040958.1-201ENST00000561102 201 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 MIR548Z-201ENST00000584743 97 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 AC145423.2-201ENST00000610631 239 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 AC019176.2-201ENST00000611579 315 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 U3.53-201ENST00000628922 216 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 AC012442.3-202ENST00000636742 206 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 AC091564.4-201ENST00000533934 2194 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
GFRA3O60609 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
GFRA3O60609 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 MUC2-202ENST00000613187 4845 ntBASIC4.62□□□□□ -1.67
GFRA3O60609 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
GFRA3O60609 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
GFRA3O60609 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA3O60609 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
GFRA3O60609 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
GFRA3O60609 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
GFRA3O60609 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 Y_RNA.4-201ENST00000362333 112 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 RNA5SP119-201ENST00000362715 117 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 RNU6-170P-201ENST00000362832 104 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
GFRA3O60609 RNU6-616P-201ENST00000384353 107 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 MIR518D-201ENST00000385014 87 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 Y_RNA.607-201ENST00000410597 98 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 RNA5SP504-201ENST00000410676 117 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 Y_RNA.611-201ENST00000410682 108 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AL445584.1-201ENST00000431451 330 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AC000111.2-201ENST00000448200 210 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AL451050.1-201ENST00000450126 415 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 RN7SL814P-201ENST00000487715 300 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 RPL23AP54-201ENST00000495129 419 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 RNY4P20-201ENST00000516678 93 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 RNA5SP290-201ENST00000517133 127 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.61□□□□□ -1.67
GFRA3O60609 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.61□□□□□ -1.67
GFRA3O60609 MIR4513-201ENST00000581077 86 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 MIR4668-201ENST00000582284 70 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.61□□□□□ -1.67
GFRA3O60609 AC005972.2-201ENST00000604690 348 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AC019159.1-201ENST00000605094 187 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AL121932.1-201ENST00000605542 214 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 SNORA51-201ENST00000606420 132 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AC093732.2-201ENST00000607950 274 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GFRA3O60609 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
GFRA3O60609 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.61□□□□□ -1.67
GFRA3O60609 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
GFRA3O60609 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA3O60609 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
GFRA3O60609 AC006971.1-201ENST00000407916 4486 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms