Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC091144.1-201ENST00000519573 138 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC025755.1-201ENST00000521306 278 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 MIR5047-201ENST00000579212 100 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC010900.2-201ENST00000604508 210 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 uc_338.25-201ENST00000613756 156 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AP001282.2-201ENST00000616149 309 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC137590.2-201ENST00000619709 240 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.98□□□□□ -1.77
SRGAP3O43295 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
SRGAP3O43295 AC004925.1-201ENST00000624256 2706 ntBASIC3.98□□□□□ -1.77
SRGAP3O43295 AF117829.1-206ENST00000621883 3802 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.97□□□□□ -1.77
SRGAP3O43295 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.97□□□□□ -1.77
SRGAP3O43295 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.97□□□□□ -1.77
SRGAP3O43295 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SRGAP3O43295 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.97□□□□□ -1.77
SRGAP3O43295 Y_RNA.20-201ENST00000362479 113 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 RNU6-428P-201ENST00000362942 107 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 SNORA38.1-201ENST00000364172 131 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
SRGAP3O43295 RNU6-338P-201ENST00000383888 105 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 MIR548M-201ENST00000408260 86 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 RNU6-1203P-201ENST00000410703 110 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 AC007560.1-201ENST00000426912 237 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 AL627311.1-201ENST00000431514 115 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 AC115115.1-201ENST00000449927 248 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 AC010285.1-201ENST00000470580 392 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 RPS20P22-201ENST00000473700 357 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 AL160314.1-201ENST00000490836 438 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.97□□□□□ -1.77
SRGAP3O43295 SCARNA15.2-201ENST00000516409 127 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 SCARNA20.6-201ENST00000517251 106 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 IGKV2-23-201ENST00000518729 323 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.97□□□□□ -1.77
SRGAP3O43295 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.97□□□□□ -1.77
SRGAP3O43295 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.97□□□□□ -1.77
SRGAP3O43295 MIR5004-201ENST00000579078 107 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 MIR5195-201ENST00000583555 115 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 AC091903.1-201ENST00000624322 454 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.97□□□□□ -1.77
SRGAP3O43295 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.96□□□□□ -1.77
SRGAP3O43295 USP8P1-201ENST00000494673 3183 ntBASIC3.96□□□□□ -1.77
SRGAP3O43295 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.96□□□□□ -1.78
SRGAP3O43295 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
SRGAP3O43295 RNU1-75P-201ENST00000347264 129 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SRGAP3O43295 Y_RNA.27-201ENST00000362540 103 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 Y_RNA.54-201ENST00000362766 105 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 Y_RNA.237-201ENST00000364439 102 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 Y_RNA.358-201ENST00000365491 99 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.96□□□□□ -1.78
SRGAP3O43295 MIR215-201ENST00000384858 110 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SRGAP3O43295 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.96□□□□□ -1.78
SRGAP3O43295 Z85995.1-201ENST00000415547 335 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRGAP3O43295 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRGAP3O43295 SDAD1P3-201ENST00000427380 333 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 NDUFB1P2-201ENST00000449477 176 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 AL513124.1-201ENST00000450410 614 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.96□□□□□ -1.78
SRGAP3O43295 PRELID3BP1-201ENST00000457142 540 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.96□□□□□ -1.78
SRGAP3O43295 AC067942.3-201ENST00000512025 362 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 Y_RNA.713-201ENST00000517013 96 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 SNORA31.19-201ENST00000517079 126 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.96□□□□□ -1.78
SRGAP3O43295 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRGAP3O43295 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.78
SRGAP3O43295 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.96□□□□□ -1.78
SRGAP3O43295 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRGAP3O43295 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.95□□□□□ -1.78
SRGAP3O43295 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRGAP3O43295 AL391987.6-201ENST00000305671 199 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 U3.13-201ENST00000364804 214 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 Y_RNA.458-201ENST00000384240 102 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 MIR34A-201ENST00000385130 110 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.95□□□□□ -1.78
SRGAP3O43295 RPL27AP8-201ENST00000424277 446 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.95□□□□□ -1.78
SRGAP3O43295 AC004383.1-201ENST00000438135 289 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AC079354.2-201ENST00000453523 154 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.95□□□□□ -1.78
SRGAP3O43295 AC010469.2-201ENST00000496412 480 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AL359273.1-201ENST00000510918 627 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AC109479.2-201ENST00000517842 174 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 DEFB108E-201ENST00000524692 240 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
SRGAP3O43295 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.95□□□□□ -1.78
SRGAP3O43295 AC093023.1-201ENST00000547375 507 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AL137100.2-201ENST00000555786 315 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 MED28P6-201ENST00000558776 231 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.95□□□□□ -1.78
SRGAP3O43295 MIR376A1-201ENST00000616574 68 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AC018692.3-201ENST00000623929 123 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 AC073476.4-201ENST00000628409 72 ntBASIC3.95□□□□□ -1.78
SRGAP3O43295 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
SRGAP3O43295 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRGAP3O43295 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms