Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC005046.1-201ENST00000608515 625 ntBASIC2.52□□□□□ -2.01
TO15178 AC093913.1-201ENST00000614178 329 ntBASIC2.52□□□□□ -2.01
TO15178 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.52□□□□□ -2.01
TO15178 AC244517.12-201ENST00000623581 663 ntBASIC2.52□□□□□ -2.01
TO15178 MIR7157-201ENST00000635801 60 ntBASIC2.52□□□□□ -2.01
TO15178 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
TO15178 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TO15178 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TO15178 SNORD114-19-201ENST00000363072 75 ntBASIC2.51□□□□□ -2.01
TO15178 RNU6-105P-201ENST00000363909 104 ntBASIC2.51□□□□□ -2.01
TO15178 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
TO15178 Y_RNA.414-201ENST00000384011 101 ntBASIC2.51□□□□□ -2.01
TO15178 RNU1-138P-201ENST00000384093 164 ntBASIC2.51□□□□□ -2.01
TO15178 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
TO15178 NDUFB4P4-201ENST00000404822 243 ntBASIC2.51□□□□□ -2.01
TO15178 MTND1P23-201ENST00000416931 372 ntBASIC2.51□□□□□ -2.01
TO15178 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.51□□□□□ -2.01
TO15178 AC138623.1-201ENST00000418060 216 ntBASIC2.51□□□□□ -2.01
TO15178 AC097463.2-201ENST00000421074 142 ntBASIC2.51□□□□□ -2.01
TO15178 MTCO3P18-201ENST00000440206 761 ntBASIC2.51□□□□□ -2.01
TO15178 AL139109.1-201ENST00000455491 297 ntBASIC2.51□□□□□ -2.01
TO15178 AP001025.1-201ENST00000486139 332 ntBASIC2.51□□□□□ -2.01
TO15178 AK3P2-201ENST00000507976 429 ntBASIC2.51□□□□□ -2.01
TO15178 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.51□□□□□ -2.01
TO15178 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.51□□□□□ -2.01
TO15178 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.51□□□□□ -2.01
TO15178 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.51□□□□□ -2.01
TO15178 AC105137.2-201ENST00000569073 466 ntBASIC2.51□□□□□ -2.01
TO15178 AC100830.2-201ENST00000581636 240 ntBASIC2.51□□□□□ -2.01
TO15178 MIR3199-1-201ENST00000582434 88 ntBASIC2.51□□□□□ -2.01
TO15178 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.51□□□□□ -2.01
TO15178 VN1R107P-201ENST00000601784 209 ntBASIC2.51□□□□□ -2.01
TO15178 CTHRC1P1-201ENST00000605383 469 ntBASIC2.51□□□□□ -2.01
TO15178 AC010297.1-201ENST00000623948 149 ntBASIC2.51□□□□□ -2.01
TO15178 AC006386.2-201ENST00000624491 75 ntBASIC2.51□□□□□ -2.01
TO15178 AC012005.1-201ENST00000624575 75 ntBASIC2.51□□□□□ -2.01
TO15178 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TO15178 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.51□□□□□ -2.01
TO15178 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TO15178 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.51□□□□□ -2.01
TO15178 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TO15178 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TO15178 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
TO15178 Y_RNA.86-201ENST00000363020 111 ntBASIC2.5□□□□□ -2.01
TO15178 RNU6-486P-201ENST00000363116 107 ntBASIC2.5□□□□□ -2.01
TO15178 RNU6-525P-201ENST00000363685 104 ntBASIC2.5□□□□□ -2.01
TO15178 RNU6-827P-201ENST00000365553 106 ntBASIC2.5□□□□□ -2.01
TO15178 RNU6-128P-201ENST00000383976 107 ntBASIC2.5□□□□□ -2.01
TO15178 RNU6-622P-201ENST00000384272 103 ntBASIC2.5□□□□□ -2.01
TO15178 RNU6-1328P-201ENST00000410938 106 ntBASIC2.5□□□□□ -2.01
TO15178 AL139413.1-201ENST00000421309 217 ntBASIC2.5□□□□□ -2.01
TO15178 AL513185.2-201ENST00000425543 193 ntBASIC2.5□□□□□ -2.01
TO15178 RPS15AP10-201ENST00000432472 382 ntBASIC2.5□□□□□ -2.01
TO15178 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.5□□□□□ -2.01
TO15178 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.5□□□□□ -2.01
TO15178 MTCO2P3-201ENST00000442543 421 ntBASIC2.5□□□□□ -2.01
TO15178 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.5□□□□□ -2.01
TO15178 AC112771.1-201ENST00000463581 102 ntBASIC2.5□□□□□ -2.01
TO15178 AC018437.1-201ENST00000492214 406 ntBASIC2.5□□□□□ -2.01
TO15178 PRDX4P1-201ENST00000507189 574 ntBASIC2.5□□□□□ -2.01
TO15178 RN7SKP132-201ENST00000516001 208 ntBASIC2.5□□□□□ -2.01
TO15178 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.5□□□□□ -2.01
TO15178 CKS1BP7-201ENST00000522230 235 ntBASIC2.5□□□□□ -2.01
TO15178 AC079598.5-201ENST00000547460 117 ntBASIC2.5□□□□□ -2.01
TO15178 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
TO15178 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TO15178 MIR7106-201ENST00000612419 65 ntBASIC2.5□□□□□ -2.01
TO15178 AC024581.2-201ENST00000619986 252 ntBASIC2.5□□□□□ -2.01
TO15178 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TO15178 Z75746.1-201ENST00000440243 2080 ntBASIC2.49□□□□□ -2.01
TO15178 RNU6-1010P-201ENST00000362757 107 ntBASIC2.49□□□□□ -2.01
TO15178 RNU6-428P-201ENST00000362942 107 ntBASIC2.49□□□□□ -2.01
TO15178 RNU6-336P-201ENST00000364891 107 ntBASIC2.49□□□□□ -2.01
TO15178 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TO15178 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
TO15178 SNORD73A-201ENST00000386062 65 ntBASIC2.49□□□□□ -2.01
TO15178 AL445529.1-201ENST00000398713 389 ntBASIC2.49□□□□□ -2.01
TO15178 RPS29P13-201ENST00000402041 169 ntBASIC2.49□□□□□ -2.01
TO15178 FGF7P8-201ENST00000402994 292 ntBASIC2.49□□□□□ -2.01
TO15178 VN1R36P-201ENST00000414936 291 ntBASIC2.49□□□□□ -2.01
TO15178 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
TO15178 RPL30P16-201ENST00000419341 429 ntBASIC2.49□□□□□ -2.01
TO15178 UBE2V1P4-201ENST00000425374 344 ntBASIC2.49□□□□□ -2.01
TO15178 RBMX2P4-201ENST00000441256 376 ntBASIC2.49□□□□□ -2.01
TO15178 AC007969.2-201ENST00000441891 191 ntBASIC2.49□□□□□ -2.01
TO15178 RNU7-66P-201ENST00000459469 62 ntBASIC2.49□□□□□ -2.01
TO15178 RNU6-1037P-201ENST00000459571 107 ntBASIC2.49□□□□□ -2.01
TO15178 AC096576.1-201ENST00000489014 359 ntBASIC2.49□□□□□ -2.01
TO15178 AC008628.2-201ENST00000502605 298 ntBASIC2.49□□□□□ -2.01
TO15178 AC018710.1-201ENST00000506509 158 ntBASIC2.49□□□□□ -2.01
TO15178 RNU6-1332P-201ENST00000516666 104 ntBASIC2.49□□□□□ -2.01
TO15178 SCARNA3-201ENST00000517097 143 ntBASIC2.49□□□□□ -2.01
TO15178 RN7SKP256-201ENST00000517201 314 ntBASIC2.49□□□□□ -2.01
TO15178 AC109329.1-201ENST00000518744 317 ntBASIC2.49□□□□□ -2.01
TO15178 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.49□□□□□ -2.01
TO15178 AP005597.4-201ENST00000526762 229 ntBASIC2.49□□□□□ -2.01
TO15178 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.49□□□□□ -2.01
TO15178 AC103996.1-201ENST00000555468 102 ntBASIC2.49□□□□□ -2.01
TO15178 GTF3AP2-201ENST00000557014 266 ntBASIC2.49□□□□□ -2.01
TO15178 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms