Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC021269.2-201ENST00000532318 330 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 HIF1AP1-201ENST00000553642 175 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 PSMA3P-201ENST00000555485 635 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 AC136619.2-201ENST00000563361 631 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 MIR5007-201ENST00000583098 95 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.08□□□□□ -2.08
PDLIM1O00151 AC073410.2-201ENST00000603240 332 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 AL138963.2-201ENST00000605137 226 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 AC080013.6-201ENST00000606185 215 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 RNU6-6P-201ENST00000606623 107 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
PDLIM1O00151 Z82243.1-201ENST00000609432 473 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
PDLIM1O00151 AC022418.1-201ENST00000624118 445 ntBASIC2.08□□□□□ -2.08
PDLIM1O00151 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.08□□□□□ -2.08
PDLIM1O00151 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDLIM1O00151 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PDLIM1O00151 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDLIM1O00151 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.07□□□□□ -2.08
PDLIM1O00151 RNU6-78P-201ENST00000362897 107 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 Y_RNA.409-201ENST00000383990 98 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 SNORA16.2-201ENST00000390991 127 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 RNU6-1158P-201ENST00000391167 107 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 OR9R1P-201ENST00000412200 877 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.07□□□□□ -2.08
PDLIM1O00151 AC003685.2-201ENST00000422795 395 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 AL591043.1-201ENST00000432461 424 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 AL606489.2-201ENST00000433886 234 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 AL122001.1-201ENST00000457027 370 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 AC107401.1-201ENST00000503426 685 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM1O00151 RNU2-69P-201ENST00000516061 100 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM1O00151 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM1O00151 AL137161.1-201ENST00000532231 390 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.07□□□□□ -2.08
PDLIM1O00151 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.07□□□□□ -2.08
PDLIM1O00151 AL355297.2-201ENST00000604792 129 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 uc_338.15-201ENST00000615470 191 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 OR5AK4P-201ENST00000635912 903 ntBASIC2.07□□□□□ -2.08
PDLIM1O00151 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
PDLIM1O00151 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM1O00151 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM1O00151 RNU6-1010P-201ENST00000362757 107 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 Y_RNA.194-201ENST00000363985 102 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 RNU6-487P-201ENST00000365430 104 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 Y_RNA.480-201ENST00000384364 102 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 RNU1-57P-201ENST00000384491 166 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 SNORD37.1-201ENST00000390968 65 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 RNA5SP390-201ENST00000410191 113 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AC010975.2-201ENST00000427781 588 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AC073415.1-201ENST00000449240 153 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.06□□□□□ -2.08
PDLIM1O00151 SRRM1P2-201ENST00000464531 1192 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AP001025.1-201ENST00000486139 332 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AC079140.5-201ENST00000507882 310 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AC008526.1-201ENST00000509149 338 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AF213884.2-201ENST00000510417 903 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 RNU6-377P-201ENST00000515965 102 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 MTND4P7-201ENST00000523876 130 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AP001893.2-201ENST00000526949 202 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 CBX3P7-201ENST00000532876 502 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AP003034.1-201ENST00000534621 422 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AGGF1P4-201ENST00000568249 801 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.06□□□□□ -2.08
PDLIM1O00151 AC078795.2-201ENST00000602835 1252 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AL136363.2-201ENST00000604173 851 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 U4atac.1-201ENST00000618345 95 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AL590808.1-201ENST00000618696 141 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 AC073534.2-201ENST00000620377 381 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 Z69720.2-201ENST00000624755 279 ntBASIC2.06□□□□□ -2.08
PDLIM1O00151 Y_RNA.255-201ENST00000364581 97 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 Y_RNA.436-201ENST00000384097 102 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 MIR186-201ENST00000384988 86 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AL606923.1-201ENST00000406616 190 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 RNU2-16P-201ENST00000410712 136 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 RNU4-53P-201ENST00000410828 140 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AL139413.1-201ENST00000421309 217 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.05□□□□□ -2.08
PDLIM1O00151 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.05□□□□□ -2.08
PDLIM1O00151 RPL7P54-201ENST00000438336 674 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.05□□□□□ -2.08
PDLIM1O00151 CYP2C59P-201ENST00000457790 269 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 RNU2-53P-201ENST00000516257 147 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC109329.1-201ENST00000518744 317 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC118273.2-201ENST00000532092 465 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.05□□□□□ -2.08
PDLIM1O00151 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms