Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RNU6-1270P-201ENST00000517128 108 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 AC107918.3-201ENST00000533272 382 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 JPX_2.1-201ENST00000614161 69 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 MIR6758-201ENST00000620653 63 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 AC006435.5-201ENST00000624486 112 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF223E7ERA6 AC007656.2-201ENST00000624902 4547 ntBASIC4.3□□□□□ -1.72
RNF223E7ERA6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF223E7ERA6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 AC022893.2-201ENST00000564832 3296 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF223E7ERA6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF223E7ERA6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF223E7ERA6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF223E7ERA6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF223E7ERA6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 Y_RNA.437-201ENST00000384113 113 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 SNORD77.3-201ENST00000391113 65 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 AL451046.2-201ENST00000403074 277 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 MIR1912-201ENST00000410389 80 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 RPL36AP10-201ENST00000421785 322 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 RPS4XP11-201ENST00000446897 772 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 RNU7-171P-201ENST00000459581 62 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 AC008155.2-201ENST00000464337 397 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 RN7SL319P-201ENST00000480656 221 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 MIR3667-201ENST00000581025 74 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 U6.73-201ENST00000619194 103 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 MIR7703-201ENST00000620784 77 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF223E7ERA6 AC007496.3-201ENST00000624987 3443 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 AC000403.1-201ENST00000613696 3585 ntBASIC4.29□□□□□ -1.72
RNF223E7ERA6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF223E7ERA6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF223E7ERA6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF223E7ERA6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF223E7ERA6 RNU6-655P-201ENST00000362858 107 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 RNU6-690P-201ENST00000365242 106 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 MIR1283-1-201ENST00000408494 87 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.28□□□□□ -1.72
RNF223E7ERA6 AC091042.1-201ENST00000579213 173 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF223E7ERA6 AC091152.3-201ENST00000604227 325 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 AC244107.2-201ENST00000611773 76 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 U7.3-201ENST00000616123 62 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 A2MP1-204ENST00000566278 4130 ntBASIC4.28□□□□□ -1.72
RNF223E7ERA6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
RNF223E7ERA6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF223E7ERA6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
RNF223E7ERA6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF223E7ERA6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF223E7ERA6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RNF223E7ERA6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF223E7ERA6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RNF223E7ERA6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF223E7ERA6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF223E7ERA6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF223E7ERA6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF223E7ERA6 Y_RNA.10-201ENST00000362371 110 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 Y_RNA.298-201ENST00000364960 107 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 MIR124-3-201ENST00000384866 87 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 RNU6-816P-201ENST00000390914 107 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 RNU6-1268P-201ENST00000391214 107 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 RNU6-1239P-201ENST00000391310 107 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 MIR300-201ENST00000401138 83 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF223E7ERA6 RPL23AP52-201ENST00000439311 478 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 REG1CP-206ENST00000447469 496 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 RNU6-1018P-201ENST00000516577 106 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 RNU5F-4P-201ENST00000516581 114 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 RNU6-1098P-201ENST00000516772 96 ntBASIC4.27□□□□□ -1.73
RNF223E7ERA6 RNU6-928P-201ENST00000516876 104 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms