Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC090617.10-201ENST00000624308 134 ntBASIC2.19□□□□□ -2.06
SRRM4A7MD48 MTND4P29-201ENST00000503122 1372 ntBASIC2.19□□□□□ -2.06
SRRM4A7MD48 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.19□□□□□ -2.06
SRRM4A7MD48 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 Y_RNA.61-201ENST00000362835 102 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 RNA5SP387-201ENST00000364226 106 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 SNORA9-201ENST00000384215 133 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SRRM4A7MD48 AL138827.1-201ENST00000402666 306 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 AL162578.1-201ENST00000406202 378 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 POLHP1-201ENST00000411806 470 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 CYCSP48-201ENST00000417124 323 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 MTND4LP16-201ENST00000440828 295 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 MTND3P16-201ENST00000452205 344 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 MTND1P11-201ENST00000456661 876 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 RPS3P1-201ENST00000456781 192 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 RNU7-138P-201ENST00000459479 64 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 DYNLL1P5-201ENST00000467158 270 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 SNORA14.1-201ENST00000516113 141 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 RNU6-826P-201ENST00000516827 104 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 AC087854.1-201ENST00000519706 414 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 C8orf59P2-201ENST00000603441 271 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 AL136221.1-201ENST00000621449 509 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.18□□□□□ -2.06
SRRM4A7MD48 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.18□□□□□ -2.06
SRRM4A7MD48 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-655P-201ENST00000362858 107 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 SNORD56.1-201ENST00000362913 68 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 Y_RNA.231-201ENST00000364358 102 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-1303P-201ENST00000364841 107 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 Y_RNA.333-201ENST00000365274 102 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-38P-201ENST00000384085 107 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-767P-201ENST00000384132 107 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-1222P-201ENST00000384615 107 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 MIR592-201ENST00000384959 97 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 MIR186-201ENST00000384988 86 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 MIR514A2-201ENST00000385131 88 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 MIR514A3-201ENST00000385132 88 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 MIR23A-201ENST00000385245 73 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNA5SP219-201ENST00000390940 113 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-1148P-201ENST00000410992 104 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 AC003685.2-201ENST00000422795 395 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 SRIP2-201ENST00000428470 166 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 UBE2V1P7-201ENST00000446395 340 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 AMD1P1-201ENST00000457220 922 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-333P-201ENST00000459117 107 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 snoU13.14-201ENST00000459372 104 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 HMGN2P26-201ENST00000463169 339 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RPL21P99-201ENST00000480369 423 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 AP001025.1-201ENST00000486139 332 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 AC008526.1-201ENST00000509149 338 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 MTND3P22-201ENST00000510932 243 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 AC079600.2-201ENST00000550076 130 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 APOOP1-201ENST00000604695 592 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 RNU6-89P-201ENST00000606519 100 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 AC093732.2-201ENST00000607950 274 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 AL359198.2-201ENST00000611836 194 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 AC121333.1-201ENST00000567488 2709 ntBASIC2.17□□□□□ -2.06
SRRM4A7MD48 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.17□□□□□ -2.06
SRRM4A7MD48 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 RNU6-845P-201ENST00000362578 103 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 RNU6-105P-201ENST00000363909 104 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 Y_RNA.263-201ENST00000364659 114 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 EIF4E2P1-201ENST00000393781 255 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AL133475.1-201ENST00000404414 305 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 Y_RNA.615-201ENST00000410769 117 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 PDCL2P1-201ENST00000419302 352 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 MTND4P28-201ENST00000426217 387 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 RPS15AP10-201ENST00000432472 382 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC087499.2-201ENST00000432861 149 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 ERLEC1P1-201ENST00000433806 578 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms