Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AP003034.1-201ENST00000534621 422 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AP001004.1-201ENST00000582468 324 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AC123912.5-201ENST00000605470 343 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AC092106.3-201ENST00000611308 722 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 Y_RNA.99-201ENST00000363138 105 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-39P-201ENST00000384344 107 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 MIR29B2-201ENST00000385055 81 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 RNA5SP390-201ENST00000410191 113 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 RNU2-41P-201ENST00000410991 178 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 EEF1A1P40-201ENST00000412883 573 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL669831.1-202ENST00000428504 417 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL603825.1-201ENST00000438481 80 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC092473.1-201ENST00000441098 221 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 KATNBL1P3-201ENST00000443475 909 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC079448.1-201ENST00000449377 373 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL009048.1-201ENST00000450437 298 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC112206.4-201ENST00000515142 405 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 RNA5SP445-201ENST00000515889 115 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-123P-201ENST00000516163 102 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC068338.1-201ENST00000565567 176 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 MIR3169-201ENST00000578032 83 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 MIR548AC-201ENST00000585049 88 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC073413.2-201ENST00000604332 360 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL158032.1-201ENST00000605401 106 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC012409.4-201ENST00000612923 249 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL359547.2-201ENST00000615810 418 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC104010.1-201ENST00000616889 150 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AL590240.4-201ENST00000616908 390 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 SCARNA4-202ENST00000625402 129 ntBASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.97□□□□□ -2.25
TRAV41A0A0B4J266 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 OR4G2P-201ENST00000328113 903 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 SNORD56.1-201ENST00000362913 68 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RNA5SP493-201ENST00000364115 91 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 SNORD114-6-201ENST00000364393 72 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RNU4-91P-201ENST00000364778 135 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 Y_RNA.338-201ENST00000365320 114 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-1179P-201ENST00000384667 107 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RPL23AP36-201ENST00000413895 458 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 NCOR1P3-201ENST00000420479 303 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RPS6P15-201ENST00000431996 751 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC084290.1-201ENST00000434995 374 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AL022238.1-201ENST00000442557 355 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 USP9YP17-201ENST00000444617 696 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 MTND2P4-201ENST00000445034 1004 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AL035666.1-201ENST00000446195 348 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC132942.1-201ENST00000486753 483 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RPL30P1-201ENST00000488676 339 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 MTCYBP35-201ENST00000503630 1137 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RNU7-51P-201ENST00000516560 62 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 SNORA31.17-201ENST00000516953 127 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC084364.2-201ENST00000546924 395 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 TRAV32-201ENST00000553993 340 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 MIR4498-201ENST00000577599 66 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 MIR4509-3-201ENST00000578671 94 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 MIR4509-2-201ENST00000583920 94 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC121334.2-201ENST00000605387 271 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 MIR4509-1-201ENST00000618224 94 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AC131159.1-201ENST00000621854 213 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 RMST_7.1-201ENST00000621935 268 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 AP002371.2-201ENST00000624450 503 ntBASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV41A0A0B4J266 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 SNORD56.2-201ENST00000363242 71 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-23P-201ENST00000363283 107 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-939P-201ENST00000384634 107 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 BTF3L4P1-201ENST00000413813 468 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms