Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RNA5SP493-201ENST00000364115 91 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-487P-201ENST00000365430 104 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 FTH1P12-201ENST00000432137 551 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 PTENP1-201ENST00000447117 1215 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC005908.1-201ENST00000468701 347 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 RNU6-965P-201ENST00000516721 96 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC092451.2-201ENST00000538746 658 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 AC009269.6-201ENST00000621778 588 ntBASIC0.92□□□□□ -2.26
SCN10AQ9Y5Y9 SNORD33-201ENST00000362761 85 ntBASIC0.91□□□□□ -2.26
SCN10AQ9Y5Y9 CBX3P9-201ENST00000402326 552 ntBASIC0.91□□□□□ -2.26
SCN10AQ9Y5Y9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.91□□□□□ -2.26
SCN10AQ9Y5Y9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.91□□□□□ -2.26
SCN10AQ9Y5Y9 AC087477.1-201ENST00000465747 340 ntBASIC0.91□□□□□ -2.26
SCN10AQ9Y5Y9 AP003392.2-201ENST00000527269 208 ntBASIC0.91□□□□□ -2.26
SCN10AQ9Y5Y9 AP003034.1-201ENST00000534621 422 ntBASIC0.91□□□□□ -2.26
SCN10AQ9Y5Y9 LINC02555-201ENST00000563933 1951 ntBASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AL359704.1-201ENST00000411586 781 ntBASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AL953862.1-201ENST00000423016 168 ntBASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AL627311.1-201ENST00000431514 115 ntBASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AC104806.1-201ENST00000508720 308 ntBASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AC087897.1-201ENST00000550134 156 ntBASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 AL159153.1-201ENST00000619688 317 ntBASIC0.9□□□□□ -2.26
SCN10AQ9Y5Y9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 MIR193B-201ENST00000384907 83 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AL357139.1-201ENST00000407792 426 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC009518.2-201ENST00000418056 731 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AL358176.2-201ENST00000425769 204 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AL096829.2-201ENST00000446582 742 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 SNORD116-28-201ENST00000516123 91 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 BNIP3P30-201ENST00000601184 574 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 Z82243.1-201ENST00000609432 473 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC093648.1-201ENST00000623546 606 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 AC090517.3-201ENST00000625170 141 ntBASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SCN10AQ9Y5Y9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 AL589826.1-201ENST00000340697 249 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 Y_RNA.99-201ENST00000363138 105 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 RNU1-124P-201ENST00000363861 145 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 SNORD114-6-201ENST00000364393 72 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 SNORA70.7-201ENST00000384159 133 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 MIR19A-201ENST00000384878 82 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 RNA5SP390-201ENST00000410191 113 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 RPS15AP10-201ENST00000432472 382 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 USP9YP17-201ENST00000444617 696 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 MTCO2P25-201ENST00000447065 681 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 HMGB1P28-201ENST00000507778 552 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 RNA5SP404-201ENST00000517118 132 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 HSPE1P19-201ENST00000603327 295 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 AC004908.3-201ENST00000610248 625 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 AL138955.1-201ENST00000622881 1040 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 MTND5P33-201ENST00000571250 1450 ntBASIC0.89□□□□□ -2.27
SCN10AQ9Y5Y9 RNA5SP457-201ENST00000363657 124 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 RNU6-1164P-201ENST00000364428 107 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 SNORD116-20-201ENST00000384529 92 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 CBX3P6-201ENST00000430257 527 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 NEFMP1-201ENST00000443423 1006 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 AC093259.1-201ENST00000509755 300 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 RNY4P37-201ENST00000516225 96 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 LRRC6P1-201ENST00000532188 885 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 AL160236.1-201ENST00000556317 195 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 AC008133.2-201ENST00000624540 351 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 MIR3529-201ENST00000637713 78 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 RNU6-271P-201ENST00000363858 105 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 MIR618-201ENST00000385287 98 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 AC139712.2-201ENST00000424302 339 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 UBE2V1P8-201ENST00000437166 265 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 RPS26P55-201ENST00000471178 356 ntBASIC0.88□□□□□ -2.27
SCN10AQ9Y5Y9 RPL39P36-201ENST00000490784 156 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms