Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC233266.1-201ENST00000454518 96 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 RPS26P45-201ENST00000471748 340 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 AC115989.2-201ENST00000578640 563 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 MIR4298-201ENST00000584380 73 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 RAC1P9-201ENST00000604990 392 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 AC242852.1-201ENST00000612151 96 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 AC244015.1-201ENST00000622301 99 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 U6.101-201ENST00000637707 76 ntBASIC-0.01□□□□□ -2.41
AP4S1Q9Y587 RNU6-582P-201ENST00000362989 107 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 RNU6-252P-201ENST00000363232 107 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 RNA5SP259-201ENST00000365541 109 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 RPL22P18-201ENST00000417197 377 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 AC093519.1-201ENST00000566109 298 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 MIR4431-201ENST00000579990 94 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 U6.99-201ENST00000637524 83 ntBASIC-0.02□□□□□ -2.41
AP4S1Q9Y587 SNORD89-201ENST00000390981 114 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 RPL21P1-201ENST00000399532 476 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 MTND4P20-201ENST00000424125 869 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 snoU13.30-201ENST00000458951 104 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 RPS26P48-201ENST00000491713 339 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 AC048346.1-201ENST00000510247 144 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 AL442163.3-201ENST00000554110 156 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 LARP7P1-201ENST00000605576 316 ntBASIC-0.03□□□□□ -2.41
AP4S1Q9Y587 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 RNU6-188P-201ENST00000364207 107 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 RNU6-898P-201ENST00000365627 104 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 RNU6-45P-201ENST00000384471 107 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 RNA5SP511-201ENST00000410487 115 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 TXNL1P1-201ENST00000429528 554 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 USP9YP22-201ENST00000438971 294 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 AC105758.1-201ENST00000506038 399 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 AL078603.1-201ENST00000603824 313 ntBASIC-0.04□□□□□ -2.42
AP4S1Q9Y587 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 SNORD44.1-201ENST00000363202 61 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 RNU4-45P-201ENST00000365469 141 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 RNU6-637P-201ENST00000384050 107 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AC245047.7-201ENST00000440265 293 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 DAP3P1-201ENST00000441522 278 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 RNU6-333P-201ENST00000459117 107 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 snoU13.27-201ENST00000459278 104 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 MTND5P13-201ENST00000513046 1079 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 RNU6-885P-201ENST00000516607 104 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AC095057.3-201ENST00000567102 1157 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AC136618.2-201ENST00000575091 400 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 Z98751.3-201ENST00000604447 521 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 AL356157.2-201ENST00000605122 111 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.05□□□□□ -2.42
AP4S1Q9Y587 SNORD99-201ENST00000408612 74 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 RNU2-28P-201ENST00000410457 189 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AL590556.1-201ENST00000423231 483 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 MTND1P30-201ENST00000441241 901 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 VN1R10P-201ENST00000447106 875 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 RPL39P38-201ENST00000467018 153 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AC023050.2-201ENST00000544968 387 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 NIFKP8-201ENST00000560500 874 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AC137800.2-201ENST00000574375 120 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 MIR4667-201ENST00000578933 66 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AC012557.2-201ENST00000605919 418 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AC100812.1-201ENST00000607622 580 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AC021506.2-201ENST00000612354 169 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 AC123767.1-202ENST00000620407 817 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 LINC00216-201ENST00000623548 1126 ntBASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC-0.06□□□□□ -2.42
AP4S1Q9Y587 MTND5P16-201ENST00000460269 1703 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms