Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 Z75746.1-201ENST00000440243 2080 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-486P-201ENST00000363116 107 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-1141P-201ENST00000364520 107 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 SNORD32A-201ENST00000364805 84 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 MIR517A-201ENST00000385001 87 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 MT-TD-201ENST00000387419 68 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 AL513477.1-202ENST00000417061 214 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 CYCSP48-201ENST00000417124 323 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 CST9LP2-201ENST00000437612 320 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 DAP3P1-201ENST00000441522 278 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 SNRPEP8-201ENST00000442866 260 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 RPL30P12-201ENST00000474666 353 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 AC116337.1-201ENST00000509680 687 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 PTP4A1P4-201ENST00000512479 322 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 IMMP1LP2-201ENST00000552954 492 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 Y_RNA.804-201ENST00000615262 101 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 MIR7112-201ENST00000616126 65 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 AL159153.1-201ENST00000619688 317 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 AC093908.1-201ENST00000623125 8092 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 MTND5P27-201ENST00000428871 1720 ntBASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
LSM4Q9Y4Z0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 OR56A5-201ENST00000340110 738 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RNU1-140P-201ENST00000365040 165 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-596P-201ENST00000365395 98 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-43P-201ENST00000384302 107 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-790P-201ENST00000384479 105 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 SNORA48.5-201ENST00000391143 135 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 BTF3L4P2-201ENST00000392798 346 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RPL21P3-201ENST00000395517 478 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RNA5SP229-201ENST00000410809 99 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RPL32P35-201ENST00000415214 394 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RPL23AP95-201ENST00000426806 265 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RPS15AP7-201ENST00000439294 405 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 Y_RNA.635-201ENST00000459041 101 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 snoU13.14-201ENST00000459372 104 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AC146507.2-201ENST00000460608 476 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AC091179.1-201ENST00000461606 579 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AL049873.1-201ENST00000480540 376 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-277P-201ENST00000516272 106 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 FGF7P1-201ENST00000582820 288 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 MIR4298-201ENST00000584380 73 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 AC078795.3-201ENST00000602913 472 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 uc_338.1-201ENST00000612113 180 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 MIR7157-201ENST00000635801 60 ntBASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LSM4Q9Y4Z0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 RNA5SP197-201ENST00000363357 119 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-1285P-201ENST00000363480 105 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 U8.8-201ENST00000365399 135 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 Y_RNA.356-201ENST00000365475 113 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 RNU1-57P-201ENST00000384491 166 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 Y_RNA.529-201ENST00000384586 119 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 MIR521-1-201ENST00000384902 87 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 BX276092.3-201ENST00000424182 230 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC078809.1-201ENST00000427601 140 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 MTND3P9-201ENST00000429526 346 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AL133396.1-201ENST00000432048 687 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 SNORD5.1-201ENST00000458800 75 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AP001486.1-201ENST00000463339 476 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC096576.1-201ENST00000489014 359 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 SCARNA3-201ENST00000517097 143 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 IGKV2-26-201ENST00000518305 343 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC115990.1-201ENST00000526957 301 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 COX6CP5-201ENST00000527162 228 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms