Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC004908.3-201ENST00000610248 625 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC099842.1-201ENST00000619919 596 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC097372.5-201ENST00000623665 376 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 AC022418.1-201ENST00000624118 445 ntBASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.68□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-37P-201ENST00000362692 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-1285P-201ENST00000363480 105 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-11P-201ENST00000364234 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-25P-201ENST00000383873 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-1-201ENST00000383898 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-48P-201ENST00000384161 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-36P-201ENST00000384172 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-4P-201ENST00000384205 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-5P-201ENST00000384238 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-3P-201ENST00000384314 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-16P-201ENST00000384385 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 SNORD14D-201ENST00000384390 87 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-15P-201ENST00000384534 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-2-201ENST00000384627 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-29P-201ENST00000384637 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-9-201ENST00000384776 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-33P-201ENST00000384793 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 MIR544A-201ENST00000384855 91 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNA5SP465-201ENST00000391195 109 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNA5SP489-201ENST00000410986 109 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RN7SKP284-201ENST00000411002 343 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AL158823.1-201ENST00000418441 478 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC027124.2-201ENST00000428249 105 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 CBX3P6-201ENST00000430257 527 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 IFNA20P-201ENST00000436840 528 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 MTND1P27-201ENST00000451117 902 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 PTP4A1P4-201ENST00000512479 322 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 MIR3913-1-201ENST00000577744 102 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 MIR4299-201ENST00000577899 72 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC005034.5-201ENST00000604219 466 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-6P-201ENST00000606623 107 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 YWHAEP7-203ENST00000622054 312 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AP000770.2-201ENST00000623694 100 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 AC004777.1-201ENST00000624317 287 ntBASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KCNIP3Q9Y2W7 Y_RNA.480-201ENST00000384364 102 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-393P-201ENST00000384475 107 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-1127P-201ENST00000384580 107 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 MTCO2P34-201ENST00000421994 607 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC243964.1-201ENST00000441814 261 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 FDX1P2-201ENST00000450769 375 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RPS27AP8-201ENST00000452665 445 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC013470.1-201ENST00000453438 462 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RPL23AP42-201ENST00000471152 471 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC092436.1-201ENST00000506450 503 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 MTCO3P7-201ENST00000510008 774 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RNU4-29P-201ENST00000515943 174 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RNA5SP356-201ENST00000515972 94 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RNU2-69P-201ENST00000516061 100 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 RNU5F-2P-201ENST00000516066 82 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC109479.2-201ENST00000517842 174 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC115990.1-201ENST00000526957 301 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 MTCO3P23-201ENST00000561363 289 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC068790.2-201ENST00000602601 557 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AL590229.1-201ENST00000603497 542 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AL078605.1-201ENST00000603529 500 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AC072046.2-201ENST00000618366 268 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 AP006437.1-201ENST00000641440 3685 ntBASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KCNIP3Q9Y2W7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
KCNIP3Q9Y2W7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-434P-201ENST00000384376 107 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 SNORA16.2-201ENST00000390991 127 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 RNA5SP171-201ENST00000391071 115 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 RN7SKP142-201ENST00000411236 328 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 RPL32P28-201ENST00000443577 397 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 PRPS1P1-201ENST00000445305 876 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 AC132479.1-201ENST00000449160 144 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 C1DP4-201ENST00000455429 424 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-377P-201ENST00000515965 102 ntBASIC1.65□□□□□ -2.15
KCNIP3Q9Y2W7 RNU6-965P-201ENST00000516721 96 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms