Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AC134026.1-201ENST00000623249 2239 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-1243P-201ENST00000364028 107 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-384P-201ENST00000364900 104 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 RPL21P65-201ENST00000406094 466 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AC099677.1-201ENST00000420575 175 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AL358472.1-201ENST00000431295 329 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 HSPE1P13-201ENST00000451143 297 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AC104164.2-201ENST00000496953 495 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 SUMO2P6-201ENST00000505273 288 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 HSPE1P4-201ENST00000550617 308 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 RN7SL703P-201ENST00000578485 302 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 Y_RNA.757-201ENST00000578934 114 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AC025588.3-201ENST00000604182 274 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AL034351.1-201ENST00000605288 668 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 MIR432-201ENST00000606207 94 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AC092628.2-201ENST00000622492 339 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 SAGE2P-201ENST00000420011 2126 ntBASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.38□□□□□ -1.55
PDZRN3Q9UPQ7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 MIR29B2-201ENST00000385055 81 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 UBA52P6-201ENST00000399822 382 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AL031736.2-201ENST00000426573 787 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC004386.2-201ENST00000441858 148 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AL158147.1-201ENST00000443970 75 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AL133547.1-201ENST00000448546 220 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 U8.19-201ENST00000459095 133 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 RPL23AP75-201ENST00000491601 451 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 SCARNA8-201ENST00000515924 131 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 RNA5SP519-201ENST00000516480 119 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC133485.4-201ENST00000561835 220 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC138907.4-201ENST00000570107 226 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC002545.1-201ENST00000592511 181 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC015813.4-201ENST00000610469 179 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 RMST_6.1-201ENST00000611980 203 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC090617.7-201ENST00000623952 126 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC016588.2-201ENST00000632484 3021 ntBASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.37□□□□□ -1.55
PDZRN3Q9UPQ7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-643P-201ENST00000384018 107 ntBASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 MIR329-1-201ENST00000385028 80 ntBASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 RNA5SP225-201ENST00000410874 135 ntBASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-1001P-201ENST00000411265 100 ntBASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 AC099669.2-201ENST00000616549 437 ntBASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.36□□□□□ -1.55
PDZRN3Q9UPQ7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 SNORD115-32-201ENST00000364079 82 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 Y_RNA.221-201ENST00000364248 96 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-1145P-201ENST00000384246 107 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-820P-201ENST00000384273 107 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 AL714022.1-201ENST00000439897 151 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 HMGN2P32-201ENST00000444648 269 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 RPS4XP13-201ENST00000483219 789 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-1061P-201ENST00000516530 99 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 RNA5SP395-201ENST00000516567 118 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-453P-201ENST00000516819 85 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 AC005476.1-201ENST00000554427 397 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 AC005296.1-201ENST00000616145 209 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 AL121890.5-201ENST00000620848 304 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms