Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNA5SP309-201ENST00000516670 106 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-928P-201ENST00000516876 104 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC022868.1-201ENST00000517767 391 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 CKS1BP7-201ENST00000522230 235 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC021739.1-201ENST00000559631 174 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 MIR4659A-201ENST00000580269 81 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC009779.6-201ENST00000603972 165 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC019159.1-201ENST00000605094 187 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AL354798.1-201ENST00000622505 329 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC110491.1-201ENST00000562191 2010 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA60-201ENST00000362396 134 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 U8.10-201ENST00000384260 133 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.785-201ENST00000384290 109 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RN7SKP61-201ENST00000410642 295 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AC093578.1-201ENST00000415219 368 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AL691449.1-201ENST00000426570 421 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 SSXP4-201ENST00000451349 245 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AP000870.1-201ENST00000472927 406 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 MED28P2-201ENST00000475771 317 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 PPIAP15-201ENST00000479662 484 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RPS4XP13-201ENST00000483219 789 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AP001025.1-201ENST00000486139 332 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RPS29P20-201ENST00000489592 171 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 HMGB1P35-201ENST00000503360 598 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-1114P-201ENST00000516022 107 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-1338P-201ENST00000516328 91 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RNU2-58P-201ENST00000516403 183 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AL391261.3-201ENST00000557194 520 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AC010900.2-201ENST00000604508 210 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AC096577.2-201ENST00000611455 153 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AC137590.2-201ENST00000619709 240 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AL450472.1-202ENST00000637286 180 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 AC002546.1-201ENST00000588041 2504 ntBASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.41□□□□□ -1.86
CDC42EP3Q9UKI2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CDC42EP3Q9UKI2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.4□□□□□ -1.86
CDC42EP3Q9UKI2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CDC42EP3Q9UKI2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDC42EP3Q9UKI2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CDC42EP3Q9UKI2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.4□□□□□ -1.86
CDC42EP3Q9UKI2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-843P-201ENST00000384454 104 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 MIR34B-201ENST00000385076 84 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 AL603908.1-201ENST00000406098 201 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RNU2-14P-201ENST00000411053 191 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RNA5SP306-201ENST00000411087 107 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 AC096638.1-201ENST00000444678 216 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RPL26P9-201ENST00000457466 433 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RN7SL585P-201ENST00000470538 280 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RPS29P19-201ENST00000479709 171 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 FTH1P9-201ENST00000513251 355 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-138P-201ENST00000515952 107 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 SNORA70.14-201ENST00000516205 110 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.700-201ENST00000516806 100 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 RN7SKP272-201ENST00000516988 232 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 DEFB108E-201ENST00000524692 240 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 AC027288.2-201ENST00000553028 243 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 AC023824.2-201ENST00000566185 400 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 AC009163.5-201ENST00000575421 637 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 Z82217.1-201ENST00000625157 8149 ntBASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.87
CDC42EP3Q9UKI2 ZNF962P-201ENST00000443465 3140 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms