Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 SNORD114-19-201ENST00000363072 75 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RNU6-1264P-201ENST00000383891 107 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RNU6-198P-201ENST00000384258 104 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RN7SKP51-201ENST00000410781 304 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RNU6-1199P-201ENST00000411249 104 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC009963.1-201ENST00000417265 157 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC010099.1-201ENST00000455434 375 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC010618.1-201ENST00000469924 477 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RPS29P26-201ENST00000477483 171 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC103975.1-201ENST00000482506 483 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RNA5SP446-201ENST00000515955 82 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RNU7-200P-201ENST00000516105 62 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RNU6-966P-201ENST00000516479 104 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 MIR4308-201ENST00000580634 81 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC006380.1-201ENST00000603598 186 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC108706.1-201ENST00000611053 297 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC011944.2-201ENST00000624440 683 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AC092435.4-201ENST00000623012 4159 ntBASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 RNA5SP28-201ENST00000363841 119 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 RNA5SP240-201ENST00000365355 128 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 RNU6-211P-201ENST00000384047 107 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 RNU6-394P-201ENST00000410735 107 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 AC024067.1-201ENST00000426199 223 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 VWA8P1-201ENST00000510889 176 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 MIR2116-201ENST00000517221 80 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 AP000867.2-201ENST00000532468 320 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 MIR3144-201ENST00000579460 79 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 PCGEM1.1-201ENST00000613431 131 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 AL365265.1-201ENST00000621045 234 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 AC010889.1-201ENST00000566193 2666 ntBASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXD3Q9UJU5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 AL353746.1-201ENST00000566293 6881 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 RNU6-1272P-201ENST00000362776 107 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 RNU6-653P-201ENST00000363074 106 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 MIR147B-201ENST00000390185 80 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 AC004975.1-201ENST00000428733 208 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 AC140059.1-201ENST00000489238 361 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 RNY3P16-201ENST00000516338 101 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 RNU6-344P-201ENST00000516635 111 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 EIF4A1P12-201ENST00000551910 141 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 AC091178.1-203ENST00000584586 279 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 AC140113.4-201ENST00000622087 222 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 AC005086.4-201ENST00000623065 213 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 snoU18.1-201ENST00000629629 71 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 CPHL1P-201ENST00000461341 3407 ntBASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD3Q9UJU5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 RNU6-727P-201ENST00000363592 107 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 RNA5SP151-201ENST00000365632 117 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 Y_RNA.441-201ENST00000384123 112 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 SNORA70C-201ENST00000384538 135 ntBASIC4.02□□□□□ -1.77
FOXD3Q9UJU5 MIR3074-201ENST00000384885 81 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms