Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 Y_RNA.369-201ENST00000365568 117 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 MIR487A-201ENST00000385009 80 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 MIR616-201ENST00000385293 97 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 RPS26P42-201ENST00000413485 326 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AC063976.4-201ENST00000421971 163 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AC004975.1-201ENST00000428733 208 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AC136628.3-201ENST00000521868 290 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 NDUFA5P6-201ENST00000542110 379 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AC011602.1-201ENST00000546484 331 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AL391903.3-201ENST00000612158 163 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AC068724.3-201ENST00000625906 87 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 MIR6830-201ENST00000636015 70 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AC022336.2-201ENST00000568966 2538 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 AC134026.1-201ENST00000623249 2239 ntBASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CUEDC1Q9NWM3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 AC107068.1-201ENST00000563286 4218 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 Y_RNA.179-201ENST00000363844 90 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 RNA5SP479-201ENST00000364858 117 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 RNU6-643P-201ENST00000384018 107 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 SNORA48.7-201ENST00000391302 135 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 AL590762.2-201ENST00000395798 571 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 RPL30P12-201ENST00000474666 353 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 RPL21P129-201ENST00000491732 478 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 RNU1-6P-201ENST00000516290 144 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 MIR4277-201ENST00000578298 84 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 RN7SL690P-201ENST00000582087 240 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 MIR3609-201ENST00000582661 80 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 AC006380.1-201ENST00000603598 186 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 MIR6853-201ENST00000619642 74 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 AC073308.1-201ENST00000623696 305 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 AC099654.7-201ENST00000635788 2127 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 MIR6844-201ENST00000637122 62 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 ZNF137P-201ENST00000456718 1920 ntBASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CUEDC1Q9NWM3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AL590240.1-201ENST00000334118 313 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 RNU6-1180P-201ENST00000364935 107 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 Y_RNA.329-201ENST00000365209 107 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 SNORA57.1-201ENST00000391227 145 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 ELOCP21-201ENST00000412558 336 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 HSPE1P12-201ENST00000412576 301 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AL158823.1-201ENST00000418441 478 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 RN7SL604P-201ENST00000492589 296 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AC016632.1-201ENST00000503994 196 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AC105129.1-201ENST00000560250 297 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 MIR3160-1-201ENST00000577972 85 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 MIR5688-201ENST00000580619 83 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AC006111.3-201ENST00000622137 383 ntBASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.55□□□□□ -1.68
CUEDC1Q9NWM3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CUEDC1Q9NWM3 RNU6-801P-201ENST00000364087 105 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms