Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-966P-201ENST00000516479 104 ntBASIC5.82□□□□□ -1.48
RTN4Q9NQC3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.82□□□□□ -1.48
RTN4Q9NQC3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.82□□□□□ -1.48
RTN4Q9NQC3 AC010620.2-201ENST00000600135 313 ntBASIC5.82□□□□□ -1.48
RTN4Q9NQC3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTN4Q9NQC3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.82□□□□□ -1.48
RTN4Q9NQC3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTN4Q9NQC3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.81□□□□□ -1.48
RTN4Q9NQC3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.81□□□□□ -1.48
RTN4Q9NQC3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTN4Q9NQC3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTN4Q9NQC3 MIR548B-201ENST00000385247 97 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 RNA5SP372-201ENST00000390836 115 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 HMGN1P20-201ENST00000411849 300 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 AC004552.1-201ENST00000419089 348 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 RPS26P3-201ENST00000470205 348 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 AC090543.2-201ENST00000483963 348 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 AC004057.1-201ENST00000485827 348 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 AC109329.2-201ENST00000519658 482 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.81□□□□□ -1.48
RTN4Q9NQC3 AL137100.2-201ENST00000555786 315 ntBASIC5.81□□□□□ -1.48
RTN4Q9NQC3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.81□□□□□ -1.48
RTN4Q9NQC3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 AL159152.1-201ENST00000635019 2587 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 RNU1-20P-201ENST00000363314 162 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 SNORD31B-201ENST00000364977 69 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 AC007998.1-201ENST00000474156 672 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 RNA5SP154-201ENST00000516193 111 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 IGLV3-26-201ENST00000520756 302 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 MIR3616-201ENST00000584070 92 ntBASIC5.8□□□□□ -1.48
RTN4Q9NQC3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTN4Q9NQC3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 RNU2-63P-201ENST00000410792 194 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 RN7SKP293-201ENST00000411389 296 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 CKS1BP6-201ENST00000424932 240 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 AL139148.1-201ENST00000427122 680 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 MIR5692C2-201ENST00000577959 77 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 AC011921.3-201ENST00000605540 361 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 MIR6861-201ENST00000618657 64 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 CU639417.4-201ENST00000623928 207 ntBASIC5.79□□□□□ -1.48
RTN4Q9NQC3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTN4Q9NQC3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 RNA5SP46-201ENST00000362370 120 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 RNU6-211P-201ENST00000384047 107 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 Y_RNA.464-201ENST00000384282 110 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 MIR218-1-201ENST00000384999 110 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 MIR1282-201ENST00000408865 101 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 AL049830.2-201ENST00000480072 201 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 AL138895.2-201ENST00000603019 178 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 MIR8080-201ENST00000622224 89 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 snoU18.1-201ENST00000629629 71 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 U6.115-201ENST00000636045 103 ntBASIC5.78□□□□□ -1.48
RTN4Q9NQC3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.78□□□□□ -1.48
RTN4Q9NQC3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 U3.2-201ENST00000362981 210 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 Y_RNA.150-201ENST00000363562 102 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 BTF3P11-201ENST00000426582 477 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 RN7SL601P-201ENST00000471221 293 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 AC093270.2-201ENST00000486157 792 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 AC136628.3-201ENST00000521868 290 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 AL049872.1-201ENST00000556323 322 ntBASIC5.77□□□□□ -1.49
RTN4Q9NQC3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.77□□□□□ -1.49
RTN4Q9NQC3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms