Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.63□□□□□ -2.15
HMG20AQ9NP66 AC007375.1-201ENST00000554513 578 ntBASIC1.63□□□□□ -2.15
HMG20AQ9NP66 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.63□□□□□ -2.15
HMG20AQ9NP66 AC110760.3-201ENST00000598794 467 ntBASIC1.63□□□□□ -2.15
HMG20AQ9NP66 AC025449.1-201ENST00000603896 529 ntBASIC1.63□□□□□ -2.15
HMG20AQ9NP66 AC097372.5-201ENST00000623665 376 ntBASIC1.63□□□□□ -2.15
HMG20AQ9NP66 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC138393.1-203ENST00000327086 343 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 RNU1-23P-201ENST00000363361 144 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 Y_RNA.359-201ENST00000365498 102 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 MIR186-201ENST00000384988 86 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 RNU2-20P-201ENST00000410425 191 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 PIGFP2-201ENST00000421400 651 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 MTCO2P11-201ENST00000431069 680 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 ARL2BPP4-201ENST00000506854 471 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC010486.3-201ENST00000511602 785 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC117532.1-201ENST00000514638 323 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 HSPE1P18-201ENST00000517602 280 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 CR383656.8-201ENST00000549046 145 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 SUB1P2-201ENST00000556401 297 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC093249.1-201ENST00000567049 203 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 RPL30P11-203ENST00000598995 310 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC025165.5-201ENST00000602802 578 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC087752.4-201ENST00000605911 462 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 RNU6-91P-201ENST00000607774 107 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AC026585.1-201ENST00000619582 524 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 RMST_7.1-201ENST00000621935 268 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 ELL2P3-201ENST00000457883 1602 ntBASIC1.62□□□□□ -2.15
HMG20AQ9NP66 AL390237.1-201ENST00000404226 1415 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 SNORD56.1-201ENST00000362913 68 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 SNORD114-19-201ENST00000363072 75 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNU6-1097P-201ENST00000363586 107 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 Y_RNA.159-201ENST00000363674 87 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 Y_RNA.381-201ENST00000365666 102 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNU6-622P-201ENST00000384272 103 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 MIR1302-8-201ENST00000408342 128 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNU6-607P-201ENST00000411283 108 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RN7SKP192-201ENST00000411291 327 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNU6-387P-201ENST00000411331 105 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNA5SP270-201ENST00000411361 118 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC074117.2-201ENST00000417130 397 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC132479.1-201ENST00000449160 144 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNU6-956P-201ENST00000458868 103 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNU7-182P-201ENST00000459009 62 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RNA5SP503-201ENST00000517047 117 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 MIR5692A1-201ENST00000580523 69 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC005296.1-201ENST00000616145 209 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 RMST_4.1-201ENST00000616886 107 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 AC008147.4-201ENST00000617570 1204 ntBASIC1.61□□□□□ -2.15
HMG20AQ9NP66 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMG20AQ9NP66 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 RNU6-78P-201ENST00000362897 107 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 RNU4-48P-201ENST00000365559 182 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 Y_RNA.500-201ENST00000384466 111 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 Y_RNA.553-201ENST00000384670 102 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AL596276.1-201ENST00000434465 418 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 MTCO2P16-201ENST00000436962 677 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 RPL30P12-201ENST00000474666 353 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC018868.1-201ENST00000491307 315 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 CKS1BP2-201ENST00000497342 240 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 RNU2-53P-201ENST00000516257 147 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AP002963.1-201ENST00000530590 184 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC233702.2-202ENST00000562547 291 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC006362.1-201ENST00000567392 174 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.6□□□□□ -2.15
HMG20AQ9NP66 MIR4703-201ENST00000577728 79 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AP005136.1-201ENST00000579765 429 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 MIR5583-1-201ENST00000580941 59 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC008752.3-201ENST00000588113 712 ntBASIC1.6□□□□□ -2.15
HMG20AQ9NP66 AC073410.2-201ENST00000603240 332 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms