Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 MIR3152-201ENST00000579801 74 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 MIR6758-201ENST00000620653 63 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
SENP3Q9H4L4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SENP3Q9H4L4 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.23□□□□□ -1.09
SENP3Q9H4L4 AL133243.3-201ENST00000617415 3004 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SENP3Q9H4L4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SENP3Q9H4L4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 SNORD77.2-201ENST00000391045 68 ntBASIC8.22□□□□□ -1.09
SENP3Q9H4L4 AC069240.1-201ENST00000548774 375 ntBASIC8.22□□□□□ -1.09
SENP3Q9H4L4 AC096996.1-201ENST00000563813 325 ntBASIC8.22□□□□□ -1.09
SENP3Q9H4L4 AC008745.1-201ENST00000604064 271 ntBASIC8.22□□□□□ -1.09
SENP3Q9H4L4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 AC068254.2-201ENST00000623938 3577 ntBASIC8.22□□□□□ -1.09
SENP3Q9H4L4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SENP3Q9H4L4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SENP3Q9H4L4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SENP3Q9H4L4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
SENP3Q9H4L4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SENP3Q9H4L4 MAPK10-344ENST00000641718 3746 ntBASIC8.21□□□□□ -1.09
SENP3Q9H4L4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 RN7SKP288-201ENST00000516227 268 ntBASIC8.21□□□□□ -1.1
SENP3Q9H4L4 MIR2117-201ENST00000516780 80 ntBASIC8.21□□□□□ -1.1
SENP3Q9H4L4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC8.21□□□□□ -1.1
SENP3Q9H4L4 RNU6-826P-201ENST00000516827 104 ntBASIC8.21□□□□□ -1.1
SENP3Q9H4L4 IGHV1-14-201ENST00000523391 241 ntBASIC8.21□□□□□ -1.1
SENP3Q9H4L4 MIR6079-201ENST00000635807 62 ntBASIC8.21□□□□□ -1.1
SENP3Q9H4L4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SENP3Q9H4L4 AL117339.4-201ENST00000608335 7063 ntBASIC8.21□□□□□ -1.1
SENP3Q9H4L4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 RNU6-865P-201ENST00000364772 107 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 RNA5SP211-201ENST00000365516 117 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 Y_RNA.443-201ENST00000384135 111 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 AL049830.1-201ENST00000468034 425 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 RN7SL385P-201ENST00000468873 276 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 AC234781.5-201ENST00000508429 271 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 MIR4458-201ENST00000578872 75 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 FAM106DP-201ENST00000586416 501 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 AC103810.6-201ENST00000606708 136 ntBASIC8.2□□□□□ -1.1
SENP3Q9H4L4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SENP3Q9H4L4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 OR51H2P-202ENST00000641424 3046 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 RNA5SP138-201ENST00000365098 114 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 AC110620.1-201ENST00000416042 228 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 snoU13.20-201ENST00000459180 104 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 RN7SL481P-201ENST00000477764 299 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 AC090821.2-201ENST00000523552 176 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 MIR132-201ENST00000591554 101 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 AC090115.4-201ENST00000609970 188 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 MIR6841-201ENST00000637129 72 ntBASIC8.19□□□□□ -1.1
SENP3Q9H4L4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SENP3Q9H4L4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SENP3Q9H4L4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SENP3Q9H4L4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SENP3Q9H4L4 USP8P1-201ENST00000494673 3183 ntBASIC8.18□□□□□ -1.1
SENP3Q9H4L4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
SENP3Q9H4L4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms