Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC079354.2-201ENST00000453523 154 ntBASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 MLLT10P2-201ENST00000506434 249 ntBASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 AP002770.2-201ENST00000543613 532 ntBASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 AC005046.1-201ENST00000608515 625 ntBASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 MIR6715A-201ENST00000615929 79 ntBASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 MIR376A1-201ENST00000616574 68 ntBASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.28□□□□□ -1.72
CNTNAP4Q9C0A0 AL359693.1-201ENST00000614959 2407 ntBASIC4.28□□□□□ -1.73
CNTNAP4Q9C0A0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 snoU2_19.2-201ENST00000363024 80 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 Y_RNA.200-201ENST00000364018 102 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 RNU1-140P-201ENST00000365040 165 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 SNORA44-201ENST00000384584 132 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 RPL21P75-201ENST00000396599 483 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 RPL21P28-201ENST00000401418 483 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AL590556.1-201ENST00000423231 483 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 TMEM167AP1-201ENST00000423409 219 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 HIGD1AP2-201ENST00000446367 280 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 RPL21P39-201ENST00000463605 483 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AC132942.1-201ENST00000486753 483 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AC093591.1-201ENST00000491435 481 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 RPL21P16-201ENST00000495531 483 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AK3P2-201ENST00000507976 429 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AL359273.1-201ENST00000510918 627 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 SYF2P1-201ENST00000550658 413 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 FAM60BP-201ENST00000578364 658 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AC073410.2-201ENST00000603240 332 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AL360181.4-201ENST00000621752 134 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 CEP170P1-201ENST00000502249 4587 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CNTNAP4Q9C0A0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 RNU6-708P-201ENST00000384217 107 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 RNU6-1081P-201ENST00000384537 107 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 AC107083.1-201ENST00000439643 279 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 RNU6-1338P-201ENST00000516328 91 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 Y_RNA.706-201ENST00000516933 99 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 DEFB108E-201ENST00000524692 240 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 AC026333.2-201ENST00000542164 106 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 AC093732.2-201ENST00000607950 274 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 AL161629.2-201ENST00000615347 275 ntBASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
CNTNAP4Q9C0A0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 Y_RNA.65-201ENST00000362846 100 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 RNU1-18P-201ENST00000363062 164 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 Y_RNA.581-201ENST00000391017 97 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AC006989.1-201ENST00000427212 131 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AC010469.2-201ENST00000496412 480 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 RNU6-377P-201ENST00000515965 102 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AC103996.1-201ENST00000555468 102 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 MIR4458-201ENST00000578872 75 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 MIR4300-201ENST00000581016 96 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 MIR4672-201ENST00000583126 81 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AC020914.4-201ENST00000597690 277 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 RPL23AP78-201ENST00000599928 470 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AC004832.4-201ENST00000608952 331 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 RNVU1-4-201ENST00000612985 164 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 LINC00901.1-201ENST00000617252 152 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AL450472.1-202ENST00000637286 180 ntBASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNTNAP4Q9C0A0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CNTNAP4Q9C0A0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNTNAP4Q9C0A0 OR4G2P-202ENST00000641004 1759 ntBASIC4.24□□□□□ -1.73
CNTNAP4Q9C0A0 Y_RNA.170-201ENST00000363746 110 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms