Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 NDUFB1P2-201ENST00000449477 176 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 ZNF886P-201ENST00000450781 723 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC012308.1-201ENST00000451232 178 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 TRMT112P2-201ENST00000512910 132 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 RNU6-237P-201ENST00000515985 71 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 SCARNA16.2-201ENST00000516520 172 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 SNORA31.16-201ENST00000516773 139 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 RNA5SP481-201ENST00000516814 122 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AL157871.3-201ENST00000557231 293 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC025678.1-201ENST00000567861 338 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 MIR5094-201ENST00000578766 85 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC078795.2-201ENST00000602835 1252 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AC016727.1-205ENST00000605437 569 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AP000654.2-201ENST00000605633 586 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AL022345.2-201ENST00000606307 135 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 BX284668.6-201ENST00000606899 438 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AL589994.2-201ENST00000621124 579 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 RNU6-853P-201ENST00000364306 107 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 RNU6-395P-201ENST00000365662 106 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 RNU6-72P-201ENST00000384285 79 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 Y_RNA.595-201ENST00000410403 105 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AL359704.1-201ENST00000411586 781 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC009518.2-201ENST00000418056 731 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 RPS15AP12-201ENST00000419498 388 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 MTCYBP5-201ENST00000423752 1135 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 SNX2P2-201ENST00000424553 323 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 TIMM9P1-201ENST00000436122 256 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 MTCO1P27-201ENST00000448269 226 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 PSMC1P5-201ENST00000512850 177 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 RNY4P37-201ENST00000516225 96 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 RNU6-113P-201ENST00000516653 101 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC091163.3-201ENST00000518269 1144 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AL132657.2-201ENST00000564417 358 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 MIR3664-201ENST00000579074 99 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC098483.2-201ENST00000603158 454 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC108706.1-201ENST00000611053 297 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 AC112204.3-201ENST00000623822 332 ntBASIC0.5□□□□□ -2.33
LIMD2Q9BT23 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
LIMD2Q9BT23 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 MIR340-201ENST00000362125 95 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 SNORA63D-201ENST00000364359 132 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 SNORD32B-201ENST00000364460 84 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 snoZ40.1-201ENST00000364540 72 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 Y_RNA.338-201ENST00000365320 114 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 RNU6-1080P-201ENST00000383982 107 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 RNU6-278P-201ENST00000390945 109 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 RNU6-1176P-201ENST00000390955 107 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 MTCO1P17-201ENST00000411522 491 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AP000275.1-201ENST00000411943 390 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 RPL21P111-201ENST00000418453 477 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC123900.1-201ENST00000420390 96 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC013262.1-201ENST00000426710 252 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 LARP1BP3-201ENST00000437229 869 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 TRBVA-201ENST00000498804 316 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC097473.1-201ENST00000508142 408 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC079140.3-201ENST00000511111 550 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC027338.1-201ENST00000514840 825 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 RNU6-914P-201ENST00000516749 109 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 SNORD60.2-201ENST00000516883 86 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC019176.1-201ENST00000518519 225 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 DEFB108A-201ENST00000530110 222 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC087897.1-201ENST00000550134 156 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 MTCYBP33-201ENST00000575007 1130 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 MIR4498-201ENST00000577599 66 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC112220.2-201ENST00000605513 533 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC008945.2-201ENST00000606056 604 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC106800.4-201ENST00000614905 153 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.49□□□□□ -2.33
LIMD2Q9BT23 AC010615.1-201ENST00000594254 1764 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms