Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 Y_RNA.255-201ENST00000364581 97 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 Y_RNA.318-201ENST00000365131 97 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 Y_RNA.436-201ENST00000384097 102 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 RNU6-434P-201ENST00000384376 107 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 SNORD116-20-201ENST00000384529 92 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 RAP1BP3-201ENST00000407180 549 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC236972.1-201ENST00000433225 199 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 snoU13.14-201ENST00000459372 104 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AP001486.1-201ENST00000463339 476 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC083798.1-201ENST00000472671 131 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC019235.1-201ENST00000503847 207 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC010493.1-201ENST00000513479 292 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC109329.1-201ENST00000518744 317 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AP003392.2-201ENST00000527269 208 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 CBX3P7-201ENST00000532876 502 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC023050.3-201ENST00000541142 333 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 SNRPGP19-201ENST00000603826 189 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC008536.2-201ENST00000607284 349 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AC092954.2-201ENST00000609103 430 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 AL359880.1-201ENST00000621879 266 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 OR5AK4P-201ENST00000635912 903 ntBASIC1.72□□□□□ -2.13
HDHD3Q9BSH5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AC138393.1-203ENST00000327086 343 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 Y_RNA.167-201ENST00000363735 109 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 SNORA38-201ENST00000363946 132 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 Y_RNA.409-201ENST00000383990 98 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 RNU4-52P-201ENST00000384209 138 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AL023284.1-201ENST00000403956 276 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 OR9R1P-201ENST00000412200 877 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 SNORD56-201ENST00000413522 71 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AIMP1P2-201ENST00000425294 312 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 HMGB1P31-201ENST00000437242 427 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 PRPS1P1-201ENST00000445305 876 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AC087884.1-201ENST00000469738 328 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 RPL22P13-201ENST00000493291 347 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AF213884.2-201ENST00000510417 903 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 COPS8P3-201ENST00000526024 482 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AL118558.2-201ENST00000556294 238 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AC012507.3-201ENST00000603556 477 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 HULC.1-201ENST00000612720 240 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AL354950.2-201ENST00000617939 290 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AC026585.1-201ENST00000619582 524 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 MIR6873-201ENST00000622788 63 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 AC139792.3-201ENST00000623525 224 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HDHD3Q9BSH5 RNU4-20P-201ENST00000365601 151 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 XGY1-201ENST00000381172 446 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 SNORD116-4-201ENST00000384733 96 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 MTCO3P40-201ENST00000392516 676 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 RNU6-648P-201ENST00000410190 107 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 RNA5SP390-201ENST00000410191 113 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 RNU4-53P-201ENST00000410828 140 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 CYCSP48-201ENST00000417124 323 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 SRIP2-201ENST00000428470 166 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AL589823.1-201ENST00000429577 183 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AL441985.1-201ENST00000457727 251 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 SNRPFP3-201ENST00000457792 225 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 RNU7-167P-201ENST00000459160 62 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 RNU6-261P-201ENST00000459506 102 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AC079804.2-201ENST00000490376 200 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 RNA5SP364-201ENST00000516938 78 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AP001893.2-201ENST00000526949 202 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 OR11H5P-201ENST00000554039 926 ntBASIC1.7□□□□□ -2.14
HDHD3Q9BSH5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms