Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 PRPS1P1-201ENST00000445305 876 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 GMFBP1-201ENST00000467831 427 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 MTND3P5-201ENST00000512798 333 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC104136.1-201ENST00000512969 394 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
SCN2AQ99250 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN2AQ99250 ACA59.2-201ENST00000517061 156 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 MTND4P7-201ENST00000523876 130 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 OR4R1P-201ENST00000529879 463 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC245505.1-201ENST00000556398 224 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC017083.3-201ENST00000609955 700 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 U6.99-201ENST00000637524 83 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN2AQ99250 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
SCN2AQ99250 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SCN2AQ99250 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN2AQ99250 RNU6-512P-201ENST00000364438 103 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 RNU6-169P-201ENST00000365336 107 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 RNU6-72P-201ENST00000384285 79 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 MIR1323-201ENST00000408090 73 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 RNU6-1328P-201ENST00000410938 106 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 OR51A5P-201ENST00000415429 942 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN2AQ99250 WARS2P1-201ENST00000429678 537 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.82□□□□□ -2.12
SCN2AQ99250 DNAJC19P4-201ENST00000440115 345 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 AL354685.2-201ENST00000448218 1447 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN2AQ99250 Y_RNA.654-201ENST00000497848 106 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 AC079140.5-201ENST00000507882 310 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN2AQ99250 SCARNA17.1-201ENST00000516211 143 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 SCARNA17.2-201ENST00000516334 143 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN2AQ99250 HIF1AP1-201ENST00000553642 175 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 AC097065.2-201ENST00000608159 533 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 HULC.1-201ENST00000612720 240 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 SCARNA17.4-201ENST00000614296 143 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 MIR8070-201ENST00000616510 88 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 MIR6134-201ENST00000617606 109 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN2AQ99250 AC099654.12-201ENST00000639868 649 ntBASIC1.82□□□□□ -2.12
SCN2AQ99250 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SCN2AQ99250 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SCN2AQ99250 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SCN2AQ99250 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 RNU6-552P-201ENST00000362869 119 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 Y_RNA.226-201ENST00000364337 114 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 SNORA24.1-201ENST00000384401 135 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 MIR301A-201ENST00000385261 86 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 RNU6-550P-201ENST00000391057 101 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.81□□□□□ -2.12
SCN2AQ99250 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN2AQ99250 CECR9-201ENST00000453421 199 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN2AQ99250 AC025033.1-201ENST00000463883 194 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 RNU6-1069P-201ENST00000516612 133 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 MIR4703-201ENST00000577728 79 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AL391646.1-201ENST00000603860 190 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AC064807.4-201ENST00000607201 407 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AP003400.5-201ENST00000624827 617 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 MIR3199-2-201ENST00000636243 86 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN2AQ99250 Y_RNA.4-201ENST00000362333 112 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 U6atac.2-201ENST00000408644 118 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AC016831.2-201ENST00000417179 352 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.81□□□□□ -2.12
SCN2AQ99250 AC027124.2-201ENST00000428249 105 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 RNU7-63P-201ENST00000459054 62 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AC019235.1-201ENST00000503847 207 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 SNORD60.2-201ENST00000516883 86 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AP003034.1-201ENST00000534621 422 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN2AQ99250 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN2AQ99250 AC010546.1-201ENST00000569391 485 ntBASIC1.81□□□□□ -2.12
SCN2AQ99250 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN2AQ99250 RNU6-37P-201ENST00000362692 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-1120P-201ENST00000362988 108 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-11P-201ENST00000364234 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-25P-201ENST00000383873 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-1-201ENST00000383898 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-48P-201ENST00000384161 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-36P-201ENST00000384172 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-4P-201ENST00000384205 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-5P-201ENST00000384238 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-3P-201ENST00000384314 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-16P-201ENST00000384385 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-393P-201ENST00000384475 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-15P-201ENST00000384534 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-2-201ENST00000384627 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-29P-201ENST00000384637 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-9-201ENST00000384776 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 RNU6-33P-201ENST00000384793 107 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AL606923.1-201ENST00000406616 190 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN2AQ99250 AL031667.1-201ENST00000440222 725 ntBASIC1.8□□□□□ -2.12
SCN2AQ99250 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms