Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 USP9YP27-201ENST00000418455 438 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 PTGES3P4-201ENST00000426243 356 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AL591806.2-201ENST00000433122 173 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AL603825.1-201ENST00000438481 80 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 RNU2-69P-201ENST00000516061 100 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 RNU6-835P-201ENST00000516974 104 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 OR5AQ1P-201ENST00000527596 927 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AP000889.2-201ENST00000532684 490 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 ZNF519P2-201ENST00000557032 169 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 AL162413.1-201ENST00000603198 110 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AL021997.1-201ENST00000605757 193 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AC084782.3-201ENST00000612282 578 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AC104237.2-201ENST00000612456 443 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 uc_338.14-201ENST00000613162 166 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEK1Q96PY6 MTND5P30-201ENST00000452896 1731 ntBASIC2.7□□□□□ -1.98
NEK1Q96PY6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.7□□□□□ -1.98
NEK1Q96PY6 Y_RNA.6-201ENST00000362350 114 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 Y_RNA.238-201ENST00000364441 102 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 RNU4-66P-201ENST00000365199 138 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 RNU4-12P-201ENST00000365233 139 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NEK1Q96PY6 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 RN7SKP223-201ENST00000410582 62 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 RNA5SP247-201ENST00000411181 105 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.69□□□□□ -1.98
NEK1Q96PY6 AL356320.1-201ENST00000429616 163 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.69□□□□□ -1.98
NEK1Q96PY6 AL121601.2-201ENST00000438019 707 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 SEPT14P3-201ENST00000439401 183 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AL732372.2-207ENST00000445840 183 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.69□□□□□ -1.98
NEK1Q96PY6 SEPT14P2-201ENST00000453405 183 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.69□□□□□ -1.98
NEK1Q96PY6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.69□□□□□ -1.98
NEK1Q96PY6 MRPL42P6-201ENST00000486397 371 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AC011005.2-201ENST00000487324 359 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 SEPT14P4-201ENST00000513445 186 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 RNU6-1038P-201ENST00000516516 104 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 RNA5SP82-201ENST00000516707 92 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 ACA59.2-201ENST00000517061 156 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 RNU6-548P-201ENST00000517083 115 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 FO082796.1-201ENST00000523795 183 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.69□□□□□ -1.98
NEK1Q96PY6 MIR6895-201ENST00000613497 78 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AC026585.1-201ENST00000619582 524 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 YWHAEP7-203ENST00000622054 312 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AC022418.1-201ENST00000624118 445 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AP003400.5-201ENST00000624827 617 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 MIR7157-201ENST00000635801 60 ntBASIC2.69□□□□□ -1.98
NEK1Q96PY6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NEK1Q96PY6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
NEK1Q96PY6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEK1Q96PY6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEK1Q96PY6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEK1Q96PY6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEK1Q96PY6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 Y_RNA.9-201ENST00000362354 101 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 RNU6-72P-201ENST00000384285 79 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 FTH1P15-201ENST00000406984 280 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 RNU2-3P-201ENST00000410144 191 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 RNU6-1068P-201ENST00000410958 103 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 CYCSP33-201ENST00000414485 327 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 DPH3P2-201ENST00000422618 250 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 MTCO1P20-201ENST00000425366 358 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 MICF-203ENST00000432679 129 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 CR769767.1-201ENST00000436337 346 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 AL139109.1-201ENST00000455491 297 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 RNU6-991P-201ENST00000516168 107 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 RNA5SP281-201ENST00000516504 135 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.68□□□□□ -1.98
NEK1Q96PY6 AL356280.1-201ENST00000603614 379 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 U2.17-201ENST00000611454 95 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 AC010378.1-201ENST00000619270 362 ntBASIC2.68□□□□□ -1.98
NEK1Q96PY6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEK1Q96PY6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NEK1Q96PY6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms