Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNA5SP519-201ENST00000516480 119 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 RNU6-1061P-201ENST00000516530 99 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 RNU6-453P-201ENST00000516819 85 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM47Q96LD4 AL161756.2-201ENST00000604597 246 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 AL121890.5-201ENST00000620848 304 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM47Q96LD4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TRIM47Q96LD4 AL161912.2-201ENST00000565707 3007 ntBASIC4.99□□□□□ -1.61
TRIM47Q96LD4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM47Q96LD4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 MAPK10-349ENST00000641767 3661 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 SNORD114-19-201ENST00000363072 75 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 Y_RNA.101-201ENST00000363154 102 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 MIR7-3-201ENST00000384898 110 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 MIR626-201ENST00000385032 94 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 SNORD72-201ENST00000390994 80 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 AL133547.1-201ENST00000448546 220 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 SCARNA13-201ENST00000516672 275 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 AL391813.1-201ENST00000603098 260 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 AC004832.5-201ENST00000608677 401 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 AL357075.2-201ENST00000614906 189 ntBASIC4.98□□□□□ -1.61
TRIM47Q96LD4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM47Q96LD4 MAPK10-304ENST00000641341 3984 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RNA5SP52-201ENST00000362448 134 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RNU1-14P-201ENST00000362759 152 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 Y_RNA.319-201ENST00000365138 92 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RNU6-339P-201ENST00000384310 107 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 Y_RNA.521-201ENST00000384560 114 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 MIR15B-201ENST00000385045 98 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RPL31P2-201ENST00000413849 377 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AL157831.1-201ENST00000426134 473 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 CYCSP32-201ENST00000440548 321 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RN7SL812P-201ENST00000493791 279 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AC099522.1-202ENST00000514718 367 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RNU6-155P-201ENST00000516347 100 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 IFITM8P-201ENST00000522529 394 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AC100770.1-201ENST00000532310 322 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 AL360181.4-201ENST00000621752 134 ntBASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TRIM47Q96LD4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.96□□□□□ -1.61
TRIM47Q96LD4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM47Q96LD4 AL133243.3-201ENST00000617415 3004 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 RNA5SP22-201ENST00000365393 109 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 RNU6-1286P-201ENST00000383871 107 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 Y_RNA.393-201ENST00000383936 102 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 RNU6-106P-201ENST00000384405 107 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 SNORA8.3-201ENST00000384679 139 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 Y_RNA.572-201ENST00000384757 98 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 ENSAP1-201ENST00000392855 326 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 RAB9AP3-201ENST00000412737 573 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AC093578.1-201ENST00000415219 368 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AL158156.1-201ENST00000422509 473 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AL391219.1-201ENST00000422570 483 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AL158147.1-201ENST00000443970 75 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AL500522.2-201ENST00000448562 343 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 RAB9AP1-201ENST00000449393 573 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 RPS27P1-201ENST00000450552 247 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM47Q96LD4 NF1P5-201ENST00000588287 448 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AC005255.1-201ENST00000593748 216 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 FAM27D1-201ENST00000612308 341 ntBASIC4.96□□□□□ -1.62
TRIM47Q96LD4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TRIM47Q96LD4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
TRIM47Q96LD4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM47Q96LD4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM47Q96LD4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM47Q96LD4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRIM47Q96LD4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AC068700.1-201ENST00000565862 3754 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 MIR10A-201ENST00000385043 110 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 SNORA75.5-201ENST00000391291 81 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 RNA5SP146-201ENST00000410743 123 ntBASIC4.95□□□□□ -1.62
TRIM47Q96LD4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms