Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 AC007363.1-201ENST00000604736 620 ntBASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 7SK.8-201ENST00000612110 250 ntBASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 7SK.11-201ENST00000615477 250 ntBASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 7SK.13-201ENST00000622040 250 ntBASIC0.83□□□□□ -2.28
CHMP6Q96FZ7 MIR515-2-201ENST00000384883 83 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 MIR515-1-201ENST00000384884 83 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 MIR548B-201ENST00000385247 97 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC083875.1-201ENST00000419509 405 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 MTCYBP42-201ENST00000444653 1130 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 PAXBP1P1-201ENST00000449315 447 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 ARL2BPP4-201ENST00000506854 471 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 RNU6-1053P-201ENST00000515930 101 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AL731537.2-201ENST00000561565 951 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC016727.1-205ENST00000605437 569 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC078880.5-201ENST00000617845 421 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC007792.1-201ENST00000623023 402 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AC093875.1-201ENST00000623688 504 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 OR4G3P-201ENST00000633500 913 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 AL133216.2-202ENST00000634512 349 ntBASIC0.82□□□□□ -2.28
CHMP6Q96FZ7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 RNU6-236P-201ENST00000363886 106 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 SNORA4.3-201ENST00000365564 137 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 Y_RNA.534-201ENST00000384599 112 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 RNU6-278P-201ENST00000390945 109 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 PIGFP2-201ENST00000421400 651 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 AL590556.1-201ENST00000423231 483 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 TPRKBP1-201ENST00000456243 481 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 RNU5A-4P-201ENST00000516588 111 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 RNA5SP490-201ENST00000517141 136 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 AL157871.3-201ENST00000557231 293 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 AC098483.2-201ENST00000603158 454 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.81□□□□□ -2.28
CHMP6Q96FZ7 MTND5P33-201ENST00000571250 1450 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 Y_RNA.33-201ENST00000362591 102 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 Y_RNA.332-201ENST00000365271 113 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 SNORA18.2-201ENST00000383865 132 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 RNU6-321P-201ENST00000410912 106 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 AC013262.1-201ENST00000426710 252 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 MTND2P3-201ENST00000452458 470 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 RPL31P3-201ENST00000458430 332 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 RNU6-751P-201ENST00000516382 101 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 RN7SKP265-201ENST00000516448 223 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 AL512347.1-201ENST00000566420 503 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 MIR1273C-201ENST00000578669 77 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 AP005136.1-201ENST00000579765 429 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 MIR3124-201ENST00000582636 67 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 VN1R107P-201ENST00000601784 209 ntBASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CHMP6Q96FZ7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 RNU2-64P-201ENST00000411315 191 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 AC006461.1-201ENST00000412637 326 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 HMGN2P9-201ENST00000476875 229 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 RNA5SP481-201ENST00000516814 122 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 BNIP3P10-201ENST00000605360 577 ntBASIC0.79□□□□□ -2.28
CHMP6Q96FZ7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 MIR337-201ENST00000362281 93 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 RNU6-1080P-201ENST00000383982 107 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 SNORD116-20-201ENST00000384529 92 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 AL359704.1-201ENST00000411586 781 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 AL365338.1-201ENST00000422282 858 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 TXNL1P1-201ENST00000429528 554 ntBASIC0.78□□□□□ -2.28
CHMP6Q96FZ7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms