Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 HAUS6P2-201ENST00000433254 2404 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 AC108206.1-201ENST00000570186 4159 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 SNORD56.1-201ENST00000362913 68 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 RNU6-105P-201ENST00000363909 104 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 RNU6-336P-201ENST00000364891 107 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 MIR548K-201ENST00000408406 116 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 U8.21-201ENST00000459536 136 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 AC018437.1-201ENST00000492214 406 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 SCARNA13-201ENST00000516672 275 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 SNORA31.26-201ENST00000517250 137 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 TRAV32-201ENST00000553993 340 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 AC008739.2-201ENST00000597006 317 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 AC097372.5-201ENST00000623665 376 ntBASIC3.54□□□□□ -1.84
CHMP4CQ96CF2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 U3.26-201ENST00000391236 204 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 RN7SKP220-201ENST00000410611 288 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AC074117.2-201ENST00000417130 397 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 RNU7-187P-201ENST00000458985 68 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AC133134.1-201ENST00000466800 359 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 MTND5P5-201ENST00000503764 376 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 SMURF2P1-201ENST00000514992 481 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 RN7SKP24-201ENST00000515888 284 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 RNU1-54P-201ENST00000517181 120 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AP002404.1-201ENST00000532005 451 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AC019159.1-201ENST00000605094 187 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 LARP7P1-201ENST00000605576 316 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AC024581.2-201ENST00000619986 252 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 AP003122.5-201ENST00000527668 3766 ntBASIC3.53□□□□□ -1.84
CHMP4CQ96CF2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CHMP4CQ96CF2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 MTND4P23-201ENST00000447723 1363 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RBBP8P1-201ENST00000449447 1844 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RPL9P7-201ENST00000330965 580 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 SNORD62.1-201ENST00000362541 86 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RNU6-843P-201ENST00000384454 104 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RNU6-851P-201ENST00000384565 107 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RNU2-41P-201ENST00000410991 178 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RNU6-325P-201ENST00000411132 105 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AL030996.1-201ENST00000411430 235 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RPL37P10-201ENST00000412884 288 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RPS3AP52-201ENST00000435639 297 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AL513043.1-201ENST00000439124 535 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 Y_RNA.635-201ENST00000459041 101 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 RPL9P9-202ENST00000466501 579 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AC117440.1-201ENST00000474107 571 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 MTND3P22-201ENST00000510932 243 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 FGF7P1-201ENST00000582820 288 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 MIR6128-201ENST00000615528 109 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 Z82195.2-201ENST00000612348 18351 ntBASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP4CQ96CF2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 SNORA80A-201ENST00000363922 136 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 SNORA18.3-201ENST00000384122 132 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 RNU6-790P-201ENST00000384479 105 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 RPS29P13-201ENST00000402041 169 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 PCMTD1P1-201ENST00000455560 355 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms