Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PHC3Q8NDX5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PHC3Q8NDX5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHC3Q8NDX5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 MIR215-201ENST00000384858 110 ntBASIC4.07□□□□□ -1.76
PHC3Q8NDX5 AL161651.1-201ENST00000440882 223 ntBASIC4.07□□□□□ -1.76
PHC3Q8NDX5 SSXP4-201ENST00000451349 245 ntBASIC4.07□□□□□ -1.76
PHC3Q8NDX5 AC006517.1-201ENST00000480485 328 ntBASIC4.07□□□□□ -1.76
PHC3Q8NDX5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 HMGN2P15-201ENST00000585707 270 ntBASIC4.07□□□□□ -1.76
PHC3Q8NDX5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHC3Q8NDX5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 snoU2_19.2-201ENST00000363024 80 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 Y_RNA.237-201ENST00000364439 102 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 SNORA70C-201ENST00000384538 135 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 RPS26P8-201ENST00000393490 348 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AC244670.1-201ENST00000436879 112 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 RPS23P5-201ENST00000495419 428 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 BTF3L4P4-201ENST00000506381 449 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AC023824.2-201ENST00000566185 400 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AC090897.2-201ENST00000581715 130 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AL359198.2-201ENST00000611836 194 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AC011476.5-201ENST00000615594 130 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AC005296.1-201ENST00000616145 209 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 AC007496.3-201ENST00000624987 3443 ntBASIC4.06□□□□□ -1.76
PHC3Q8NDX5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHC3Q8NDX5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHC3Q8NDX5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHC3Q8NDX5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHC3Q8NDX5 Y_RNA.20-201ENST00000362479 113 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 RNA5SP295-201ENST00000362655 121 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 SNORD27-201ENST00000363981 72 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 AC006011.1-201ENST00000442758 349 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 AC096638.1-201ENST00000444678 216 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 RPL39P29-201ENST00000447779 157 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 AC107626.1-201ENST00000471084 183 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 AP001025.1-201ENST00000486139 332 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 RNU6-1231P-201ENST00000517185 103 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 DEFB108E-201ENST00000524692 240 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 AC136624.4-201ENST00000573044 370 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 AL353746.1-201ENST00000566293 6881 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
PHC3Q8NDX5 RBBP8P1-201ENST00000449447 1844 ntBASIC4.05□□□□□ -1.76
PHC3Q8NDX5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 Y_RNA.352-201ENST00000365439 102 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 RNU6-926P-201ENST00000384075 107 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 RNU6-318P-201ENST00000384283 103 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 SNORA37-201ENST00000384504 129 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 Y_RNA.581-201ENST00000391017 97 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 RPL29P14-201ENST00000495837 428 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 AC115990.1-201ENST00000526957 301 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 AC027288.2-201ENST00000553028 243 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 MIR5695-201ENST00000579717 85 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 AC073657.2-201ENST00000605661 303 ntBASIC4.04□□□□□ -1.76
PHC3Q8NDX5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.04□□□□□ -1.76
PHC3Q8NDX5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHC3Q8NDX5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.03□□□□□ -1.76
PHC3Q8NDX5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PHC3Q8NDX5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PHC3Q8NDX5 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 RNA5SP130-201ENST00000364431 114 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PHC3Q8NDX5 U8.10-201ENST00000384260 133 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 RNU6-622P-201ENST00000384272 103 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 MIR591-201ENST00000385290 95 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 SNORD12B-201ENST00000410433 91 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 Y_RNA.602-201ENST00000410535 92 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.03□□□□□ -1.76
PHC3Q8NDX5 AL358075.3-201ENST00000426289 226 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 RPS15AP5-201ENST00000436276 388 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 AL441985.1-201ENST00000457727 251 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 AP002884.2-201ENST00000471647 395 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 RPL30P12-201ENST00000474666 353 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 RN7SL604P-201ENST00000492589 296 ntBASIC4.03□□□□□ -1.76
PHC3Q8NDX5 HMGB3P17-201ENST00000504195 649 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms