Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 VN1R107P-201ENST00000601784 209 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AC123912.5-201ENST00000605470 343 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AC002044.1-201ENST00000606707 158 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AC136475.10-201ENST00000620253 385 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
CCDC89Q8N998 AL365361.1-201ENST00000566942 3481 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 RNU6-552P-201ENST00000362869 119 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 RNU6-336P-201ENST00000364891 107 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 RNU6-1103P-201ENST00000384150 107 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 SNORA46.1-201ENST00000391069 153 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AL359511.1-201ENST00000402970 211 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC096920.1-201ENST00000423991 241 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC073464.1-201ENST00000429823 534 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 IFNA20P-201ENST00000436840 528 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AL360221.1-201ENST00000445989 335 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC013470.1-201ENST00000453438 462 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC89Q8N998 RNU7-63P-201ENST00000459054 62 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 RPL21P99-201ENST00000480369 423 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC89Q8N998 PTP4A1P4-201ENST00000512479 322 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 COPS8P3-201ENST00000526024 482 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC89Q8N998 MTATP6P3-201ENST00000581686 676 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC119751.7-201ENST00000600494 245 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC018889.1-201ENST00000605372 397 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC89Q8N998 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC89Q8N998 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC89Q8N998 AC069528.2-201ENST00000624849 1991 ntBASIC2.46□□□□□ -2.02
CCDC89Q8N998 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 RNA5SP276-201ENST00000362580 94 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 SNORD115-3-201ENST00000363100 82 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 RNU6-266P-201ENST00000364225 107 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 Y_RNA.553-201ENST00000384670 102 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 RN7SKP284-201ENST00000411002 343 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC006946.1-201ENST00000429106 328 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 RPL23AP3-201ENST00000453844 468 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 PMCHL2-203ENST00000457791 237 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 RNU7-167P-201ENST00000459160 62 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 MTND3P5-201ENST00000512798 333 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC022880.1-201ENST00000534017 973 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 AGGF1P4-201ENST00000568249 801 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 LARP7P3-201ENST00000579888 337 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 SNORD53-201ENST00000579969 78 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 MIR3136-201ENST00000583498 78 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC005034.5-201ENST00000604219 466 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC005000.2-201ENST00000605468 310 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 MIR1291-201ENST00000627649 87 ntBASIC2.45□□□□□ -2.02
CCDC89Q8N998 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC89Q8N998 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC89Q8N998 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC89Q8N998 AC062016.1-201ENST00000355719 319 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 RNU6-428P-201ENST00000362942 107 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 RNU6-1141P-201ENST00000364520 107 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 MIR518C-201ENST00000384822 101 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 BTF3L4P2-201ENST00000392798 346 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 MIR1262-201ENST00000408276 93 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 USP9YP27-201ENST00000418455 438 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 MTCO2P34-201ENST00000421994 607 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 AL353689.1-201ENST00000438895 199 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 RPS3AP17-201ENST00000472594 777 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AC078814.3-201ENST00000553036 491 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC89Q8N998 AL109918.3-201ENST00000603072 338 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AC107304.1-201ENST00000604229 296 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AC007621.1-201ENST00000604544 437 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 APOOP1-201ENST00000604695 592 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AL356157.2-201ENST00000605122 111 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 AL627230.6-201ENST00000611129 280 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 U2.17-201ENST00000611454 95 ntBASIC2.44□□□□□ -2.02
CCDC89Q8N998 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC89Q8N998 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC89Q8N998 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC89Q8N998 AP000560.1-201ENST00000624150 1937 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 RNU6-996P-201ENST00000365438 107 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 SNORD14D-201ENST00000384390 87 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 RNA5SP465-201ENST00000391195 109 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 RPS29P13-201ENST00000402041 169 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AL591416.1-201ENST00000404015 867 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms