Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC131281.1-201ENST00000522984 164 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 GNAI2P1-201ENST00000541815 315 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 RMST_8.1-201ENST00000610287 165 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AL591516.1-201ENST00000611326 274 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AC078938.1-201ENST00000620993 318 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AL606534.2-204ENST00000635008 178 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SYNE4Q8N205 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.67□□□□□ -1.82
SYNE4Q8N205 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.67□□□□□ -1.82
SYNE4Q8N205 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SYNE4Q8N205 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SYNE4Q8N205 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.66□□□□□ -1.82
SYNE4Q8N205 Y_RNA.210-201ENST00000364161 110 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 Y_RNA.222-201ENST00000364264 102 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SYNE4Q8N205 RNU6-214P-201ENST00000384130 107 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 RNU2-3P-201ENST00000410144 191 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 AC063976.3-201ENST00000426849 329 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 RPS15AP10-201ENST00000432472 382 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 RNU7-138P-201ENST00000459479 64 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 AC008571.1-201ENST00000467232 300 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 AP002884.2-201ENST00000471647 395 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 SNORA31.8-201ENST00000516327 108 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 RNU6-914P-201ENST00000516749 109 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.66□□□□□ -1.82
SYNE4Q8N205 AC005357.1-201ENST00000588399 301 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 AC123912.5-201ENST00000605470 343 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 RNU6-85P-201ENST00000605989 107 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 AC009487.2-201ENST00000420969 6821 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 SDAD1P2-201ENST00000441308 2028 ntBASIC3.66□□□□□ -1.82
SYNE4Q8N205 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SYNE4Q8N205 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.66□□□□□ -1.82
SYNE4Q8N205 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SYNE4Q8N205 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 Y_RNA.534-201ENST00000384599 112 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 SNORA41-201ENST00000384675 132 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 RNU2-52P-201ENST00000410680 190 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AL133396.1-201ENST00000432048 687 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC087499.2-201ENST00000432861 149 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 DYNLT3P2-201ENST00000442517 295 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC068781.1-201ENST00000488231 618 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC018437.1-201ENST00000492214 406 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC174048.1-201ENST00000603389 144 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC062037.2-201ENST00000610137 73 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AL031601.2-202ENST00000622650 282 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 MIR4272-201ENST00000635924 64 ntBASIC3.65□□□□□ -1.83
SYNE4Q8N205 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SYNE4Q8N205 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
SYNE4Q8N205 AL353746.1-201ENST00000566293 6881 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYNE4Q8N205 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYNE4Q8N205 SNORA31-201ENST00000362607 130 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNA5SP189-201ENST00000364920 115 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNU6-806P-201ENST00000365147 105 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNA5SP167-201ENST00000365461 116 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNU6-851P-201ENST00000384565 107 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 MT-TW-201ENST00000387382 68 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNU6-817P-201ENST00000391083 104 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RPL21P1-201ENST00000399532 476 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNU6-101P-201ENST00000410323 104 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 AL513331.1-201ENST00000411908 397 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.64□□□□□ -1.83
SYNE4Q8N205 AL645568.3-201ENST00000433683 316 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 AC011816.1-201ENST00000441346 546 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 AC113155.1-201ENST00000511141 769 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 MTND1P19-201ENST00000511780 315 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNU1-41P-201ENST00000516161 162 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 SNORA70.16-201ENST00000516390 95 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNU1-48P-201ENST00000516400 162 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 RNA5SP471-201ENST00000516971 106 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 CBX3P8-201ENST00000532412 525 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 HSBP1P1-201ENST00000555205 166 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
SYNE4Q8N205 MIR4524B-201ENST00000581569 115 ntBASIC3.64□□□□□ -1.83
SYNE4Q8N205 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYNE4Q8N205 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
SYNE4Q8N205 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 SNORD56.3-201ENST00000363507 71 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 RNU1-112P-201ENST00000364401 164 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 Y_RNA.314-201ENST00000365114 102 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 Y_RNA.447-201ENST00000384184 113 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 U3.42-201ENST00000408746 214 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE4Q8N205 UBE2V1P4-201ENST00000425374 344 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 VDAC1P3-201ENST00000434069 851 ntBASIC3.63□□□□□ -1.83
SYNE4Q8N205 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms