Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFX6Q8HWS3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX6Q8HWS3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX6Q8HWS3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AC108206.1-201ENST00000570186 4159 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 SNORA63.1-201ENST00000362493 131 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 SNORD56-201ENST00000413522 71 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AC093151.1-201ENST00000427711 313 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AL031274.1-201ENST00000450334 232 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 ELOCP24-201ENST00000456370 334 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 RPL30P15-201ENST00000457129 321 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 RNU7-187P-201ENST00000458985 68 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 RPL7P49-201ENST00000471402 708 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 RPS29P2-201ENST00000479278 136 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 RN7SL283P-201ENST00000489055 303 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 SMURF2P1-201ENST00000514992 481 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 MIR4503-201ENST00000582187 83 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.09□□□□□ -1.91
RFX6Q8HWS3 AL160281.1-201ENST00000605307 311 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 MTND5P19-201ENST00000424872 1794 ntBASIC3.09□□□□□ -1.91
RFX6Q8HWS3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RFX6Q8HWS3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AL353743.1-202ENST00000431724 1695 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AP003122.5-201ENST00000527668 3766 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 RNU6-1309P-201ENST00000363305 108 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 SNORA38.1-201ENST00000364172 131 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 RNU6-306P-201ENST00000384617 107 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 MIR548F4-201ENST00000408515 105 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 RN7SL807P-201ENST00000470923 297 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC128713.1-201ENST00000471495 306 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC117440.1-201ENST00000474107 571 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 RPL23AP45-201ENST00000476406 468 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC006445.1-201ENST00000491925 405 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC018437.1-201ENST00000492214 406 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC026782.1-201ENST00000512952 449 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC109479.2-201ENST00000517842 174 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AP000867.2-201ENST00000532468 320 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AL117187.1-201ENST00000555482 181 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 LINC00933-203ENST00000559812 219 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 CYCSP39-201ENST00000565821 309 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 MIR5004-201ENST00000579078 107 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC012468.1-201ENST00000604888 430 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AC018462.2-201ENST00000605375 395 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AL161629.2-201ENST00000615347 275 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 SCARNA4-202ENST00000625402 129 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 AL669831.3-213ENST00000636676 183 ntBASIC3.08□□□□□ -1.92
RFX6Q8HWS3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX6Q8HWS3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFX6Q8HWS3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RFX6Q8HWS3 Y_RNA.148-201ENST00000363557 117 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 RNU6-270P-201ENST00000364131 105 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 SNORA71.1-201ENST00000364523 117 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 RNU6-72P-201ENST00000384285 79 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 RNU6-196P-201ENST00000384315 107 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 MIR517A-201ENST00000385001 87 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 MIR34B-201ENST00000385076 84 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 AL030996.1-201ENST00000411430 235 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 AC099548.1-201ENST00000421443 426 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 RPS15AP10-201ENST00000432472 382 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.07□□□□□ -1.92
RFX6Q8HWS3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.07□□□□□ -1.92
RFX6Q8HWS3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.07□□□□□ -1.92
RFX6Q8HWS3 AL358232.1-201ENST00000448030 501 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 BTF3P15-201ENST00000455606 336 ntBASIC3.07□□□□□ -1.92
RFX6Q8HWS3 snoU109.2-201ENST00000459316 135 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms