Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDPF1Q6NVV7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AC004944.1-201ENST00000517807 3059 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AL159987.1-201ENST00000347911 293 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 SNORA31-201ENST00000362607 130 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 SNORD87-201ENST00000364849 89 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 RNA5SP129-201ENST00000410276 118 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 RNU6-855P-201ENST00000410395 104 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 RN7SKP213-201ENST00000410746 298 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AC004866.1-201ENST00000411748 78 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AL161651.1-201ENST00000440882 223 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 RPS26P15-201ENST00000488067 348 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 CYCSP26-201ENST00000534107 320 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 HMGN2P6-201ENST00000551091 273 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 EIF4A1P12-201ENST00000551910 141 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AC012616.1-201ENST00000600294 197 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 RPSAP73-201ENST00000614820 330 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AC109583.2-201ENST00000617367 129 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AC132068.1-201ENST00000623805 459 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 MIR6844-201ENST00000637122 62 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 FAM35DP-201ENST00000323387 2712 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 AC018555.1-201ENST00000567548 1980 ntBASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
CDPF1Q6NVV7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 SNORA58B-201ENST00000364259 136 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RNU6-144P-201ENST00000383951 107 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 U1.1-201ENST00000384101 164 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RNU6-460P-201ENST00000391158 108 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RNU6-1064P-201ENST00000410626 104 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RNA5SP504-201ENST00000410676 117 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RN7SKP216-201ENST00000411050 312 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RN7SKP100-201ENST00000411258 284 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AC004386.2-201ENST00000441858 148 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RNU7-141P-201ENST00000459304 62 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RPS21P4-201ENST00000487122 248 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AP001328.1-201ENST00000528550 176 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RN7SL708P-201ENST00000580952 299 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 U7.2-201ENST00000607576 63 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AL445567.2-201ENST00000618935 498 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 AC068870.2-201ENST00000620635 389 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 ZNF137P-201ENST00000456718 1920 ntBASIC3.68□□□□□ -1.82
CDPF1Q6NVV7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RNA5SP183-201ENST00000362452 119 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RNU6-1298P-201ENST00000362456 101 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RNU6-728P-201ENST00000365375 104 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RNU6-768P-201ENST00000384683 107 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 MIR3074-201ENST00000384885 81 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 MT-TT-201ENST00000387460 66 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RNY4P18-201ENST00000391107 89 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AL606845.1-201ENST00000404881 255 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 RPL23AP27-201ENST00000415161 451 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AC027124.2-201ENST00000428249 105 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 PSMD10P3-201ENST00000437000 448 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AL714022.1-201ENST00000439897 151 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 Z75741.1-201ENST00000446793 314 ntBASIC3.67□□□□□ -1.82
CDPF1Q6NVV7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms