Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 U4.7-201ENST00000638126 106 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 AC010332.2-201ENST00000613083 1904 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 AL356489.2-201ENST00000566968 3528 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF43Q68DV7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF43Q68DV7 RNU5E-7P-201ENST00000365290 117 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 Y_RNA.412-201ENST00000384001 104 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 RNU6-211P-201ENST00000384047 107 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 SNORA40-201ENST00000388090 126 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF43Q68DV7 RNU2-2P-201ENST00000410396 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 SNORA40.9-201ENST00000515895 93 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 RN7SKP234-201ENST00000517173 224 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 MIR5684-201ENST00000585074 65 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 AL645944.1-201ENST00000603857 493 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 RNU2-4P-201ENST00000606190 192 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.15-201ENST00000611544 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.16-201ENST00000613119 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.12-201ENST00000613778 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.9-201ENST00000615427 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.11-201ENST00000616345 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.2-201ENST00000616535 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.3-201ENST00000617785 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.19-201ENST00000618602 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 RNU2-1-201ENST00000618664 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.6-201ENST00000619225 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.5-201ENST00000619465 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 U2.10-201ENST00000620268 191 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 snoU18.1-201ENST00000629629 71 ntBASIC4.23□□□□□ -1.73
RNF43Q68DV7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF43Q68DV7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF43Q68DV7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNF43Q68DV7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF43Q68DV7 AL391516.1-201ENST00000554380 2449 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 FAM91A3P-201ENST00000456826 2544 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF43Q68DV7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 Y_RNA.7-201ENST00000362352 102 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 Y_RNA.23-201ENST00000362496 106 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 Y_RNA.71-201ENST00000362892 104 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 SNORD115-32-201ENST00000364079 82 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 Y_RNA.238-201ENST00000364441 102 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 MIR34A-201ENST00000385130 110 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 AC093578.1-201ENST00000415219 368 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 CR769767.1-201ENST00000436337 346 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 CYCSP32-201ENST00000440548 321 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 AC096638.1-201ENST00000444678 216 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 FABP5P15-201ENST00000453566 214 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 RPL31P61-201ENST00000496160 376 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 AC010265.1-201ENST00000513509 211 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 TGIF1P1-201ENST00000558095 802 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 MIR4782-201ENST00000577987 79 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 AC005296.1-201ENST00000616145 209 ntBASIC4.22□□□□□ -1.73
RNF43Q68DV7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF43Q68DV7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF43Q68DV7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF43Q68DV7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF43Q68DV7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF43Q68DV7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF43Q68DV7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF43Q68DV7 AL161912.2-201ENST00000565707 3007 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF43Q68DV7 SNORA9-201ENST00000384215 133 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 MIR153-2-201ENST00000385225 87 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 WARS2P1-201ENST00000429678 537 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF43Q68DV7 AL137159.1-201ENST00000452808 512 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 snoU109.2-201ENST00000459316 135 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 AC091179.1-201ENST00000461606 579 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms