Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQA1Q5Y7H0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQA1Q5Y7H0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HLA-DQA1Q5Y7H0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 ZNF962P-201ENST00000443465 3140 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNA5SP399-201ENST00000364003 117 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNU6-1145P-201ENST00000384246 107 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNU6-493P-201ENST00000391321 108 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RPL21P17-201ENST00000397467 475 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 Y_RNA.626-201ENST00000411288 95 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AP000705.1-201ENST00000454567 350 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RPL26P9-201ENST00000457466 433 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RPL30P12-201ENST00000474666 353 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AP001025.1-201ENST00000486139 332 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC016632.1-201ENST00000503994 196 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 SNORD116-28-201ENST00000516123 91 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNU6-789P-201ENST00000517105 102 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC087441.2-201ENST00000529141 262 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AP002392.1-201ENST00000537692 208 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC016256.1-201ENST00000547971 354 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AL391261.3-201ENST00000557194 520 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 MIR4423-201ENST00000580922 80 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC024220.1-201ENST00000603675 484 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 FAM35BP-202ENST00000497389 3337 ntBASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQA1Q5Y7H0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNU6-545P-201ENST00000362681 104 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 U3.19-201ENST00000390893 196 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 COX6CP10-201ENST00000416832 224 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 HMGN2P10-201ENST00000448085 265 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 NDUFB4P10-201ENST00000452541 359 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AK6P2-201ENST00000549020 471 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC021739.1-201ENST00000559631 174 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC008749.1-201ENST00000597650 306 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AL359198.2-201ENST00000611836 194 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AL110115.1-201ENST00000614396 364 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 MIR6875-201ENST00000617506 72 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 RNA5SP196-201ENST00000625967 102 ntBASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1Q5Y7H0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.65□□□□□ -1.82
HLA-DQA1Q5Y7H0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DQA1Q5Y7H0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HLA-DQA1Q5Y7H0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.82
HLA-DQA1Q5Y7H0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-1159P-201ENST00000362933 107 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.122-201ENST00000363331 96 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.292-201ENST00000364904 97 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNY4P28-201ENST00000365281 93 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-746P-201ENST00000384112 109 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 RN7SKP61-201ENST00000410642 295 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 BPY2DP-201ENST00000422208 265 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL358075.3-201ENST00000426289 226 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 TBCAP1-201ENST00000436520 327 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC244670.1-201ENST00000436879 112 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU7-120P-201ENST00000459334 63 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC117440.1-201ENST00000474107 571 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 S100A11P1-201ENST00000477525 312 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC020593.1-201ENST00000507399 299 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 SNORA25.14-201ENST00000516481 132 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-255P-201ENST00000516957 105 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 NACAP3-201ENST00000552100 481 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 KLKP1-201ENST00000595979 403 ntBASIC3.65□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC010620.2-201ENST00000600135 313 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms