Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CYCSP39-201ENST00000565821 309 ntBASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 AP001485.1-201ENST00000604799 199 ntBASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 AL138963.2-201ENST00000605137 226 ntBASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 AC005296.1-201ENST00000616145 209 ntBASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 AL590240.4-201ENST00000616908 390 ntBASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 MFSD8-236ENST00000641509 4050 ntBASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL13A1Q5TAT6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 AC018529.3-201ENST00000624212 2254 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 ZNF962P-201ENST00000443465 3140 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 MIR410-201ENST00000362222 80 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 Y_RNA.136-201ENST00000363444 102 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 Y_RNA.435-201ENST00000384095 112 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 MTHFD2P2-201ENST00000407725 247 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 RNU4-30P-201ENST00000410245 143 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 SNORA71B-202ENST00000439232 272 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 AC243964.1-201ENST00000441814 261 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 RPL26P26-201ENST00000480251 434 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 RNU7-200P-201ENST00000516105 62 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 SNORA27.4-201ENST00000516650 95 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 RNU6-1183P-201ENST00000517054 60 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 AC025627.2-201ENST00000576220 160 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 MIR432-201ENST00000606207 94 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 AL137790.1-201ENST00000634283 177 ntBASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL13A1Q5TAT6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 Y_RNA.304-201ENST00000365011 112 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 RNU1-63P-201ENST00000383902 164 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 SNORA29-201ENST00000384183 140 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 Y_RNA.570-201ENST00000384750 101 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AL451074.5-201ENST00000415894 435 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 RPL23AP95-201ENST00000426806 265 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 CYCSP4-201ENST00000429682 331 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 SNORD105B-201ENST00000458770 79 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AP001324.2-201ENST00000461163 319 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AL591473.1-201ENST00000464297 313 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AC090281.1-201ENST00000523019 276 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 H3F3AP1-201ENST00000559984 334 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 AC073349.3-201ENST00000617616 186 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 IGHVIII-44-202ENST00000636235 289 ntBASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.43□□□□□ -1.7
COL13A1Q5TAT6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 Y_RNA.40-201ENST00000362645 93 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 RNU5B-2P-201ENST00000363036 113 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 RNU6-626P-201ENST00000363354 107 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 Y_RNA.319-201ENST00000365138 92 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 RNU6-281P-201ENST00000384212 103 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 RNU6-140P-201ENST00000384566 108 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AL603825.1-201ENST00000438481 80 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AL031659.1-201ENST00000447075 539 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 SSXP4-201ENST00000451349 245 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AC091959.1-201ENST00000495857 238 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AP005660.1-201ENST00000522972 293 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 MIR3162-201ENST00000581818 82 ntBASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms