| NKX1-1 | Q15270 | AC245047.8-201 | ENST00000456455 | 284 nt | BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC099522.1-202 | ENST00000514718 | 367 nt | BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | DISC1FP1-204 | ENST00000563681 | 466 nt | TSL 3 BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MIR4429-201 | ENST00000580105 | 73 nt | BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC012493.2-201 | ENST00000595083 | 291 nt | BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | U7.2-201 | ENST00000607576 | 63 nt | BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AL110115.1-201 | ENST00000614396 | 364 nt | BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | DGKH-206 | ENST00000536612 | 3957 nt | TSL 1 (best) BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | ZNF567-203 | ENST00000585696 | 3734 nt | TSL 1 (best) BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC138409.2-201 | ENST00000514048 | 5001 nt | TSL 5 BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | LUM-201 | ENST00000266718 | 3008 nt | APPRIS P1 TSL 1 (best) BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MLF1-203 | ENST00000392822 | 2157 nt | TSL 5 BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | NSD1-204 | ENST00000439151 | 12892 nt | APPRIS P1 TSL 1 (best) BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | A2MP1-204 | ENST00000566278 | 4130 nt | BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | KTN1-214 | ENST00000554507 | 2057 nt | TSL 1 (best) BASIC | 5.7 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | GHR-208 | ENST00000612382 | 4699 nt | APPRIS P1 TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | CCDC146-201 | ENST00000285871 | 3333 nt | APPRIS P2 TSL 1 (best) BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MYO5A-201 | ENST00000356338 | 11971 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC112198.2-201 | ENST00000426589 | 6996 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | CFAP70-201 | ENST00000310715 | 3703 nt | APPRIS P1 TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC096751.1-201 | ENST00000515178 | 2202 nt | TSL 1 (best) BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU1-14P-201 | ENST00000362759 | 152 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU6-270P-201 | ENST00000364131 | 105 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SNORD87-201 | ENST00000364849 | 89 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | Y_RNA.310-201 | ENST00000365063 | 113 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNA5-8SP4-201 | ENST00000365096 | 150 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNA5SP151-201 | ENST00000365632 | 117 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | GNG5P5-201 | ENST00000420444 | 220 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | TAB3-AS2-201 | ENST00000445240 | 292 nt | TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC067945.3-201 | ENST00000456176 | 386 nt | TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RN7SL812P-201 | ENST00000493791 | 279 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AL592156.1-201 | ENST00000508758 | 304 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU1-61P-201 | ENST00000516107 | 151 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC095350.2-201 | ENST00000544034 | 201 nt | TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | NOX4-205 | ENST00000424319 | 4184 nt | TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | NCK1-204 | ENST00000469404 | 2403 nt | TSL 2 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC026241.1-201 | ENST00000517873 | 2142 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | IQCH-206 | ENST00000546225 | 3112 nt | TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | VPS13C-204 | ENST00000395898 | 11012 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | THEMIS-205 | ENST00000626040 | 3179 nt | APPRIS ALT2 TSL 2 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | NXT2-201 | ENST00000218004 | 2692 nt | TSL 1 (best) BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | KIF21A-201 | ENST00000361418 | 5044 nt | APPRIS P1 TSL 1 (best) BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | UNC5C-205 | ENST00000610318 | 9403 nt | TSL 5 BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC107068.1-201 | ENST00000563286 | 4218 nt | BASIC | 5.69 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | FYB1-201 | ENST00000351578 | 4750 nt | APPRIS P3 TSL 1 (best) BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MED13-201 | ENST00000397786 | 10465 nt | APPRIS P1 TSL 1 (best) BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | ASB5-201 | ENST00000296525 | 3031 nt | APPRIS P1 TSL 1 (best) BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU1-75P-201 | ENST00000347264 | 129 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SNORD114-7-201 | ENST00000362520 | 77 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU1-83P-201 | ENST00000363426 | 164 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU6-407P-201 | ENST00000365280 | 104 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AL157709.1-201 | ENST00000412695 | 424 nt | TSL 3 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AL451129.1-201 | ENST00000437471 | 285 nt | TSL 3 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC010891.1-201 | ENST00000449963 | 448 nt | TSL 2 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU7-197P-201 | ENST00000458836 | 62 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU7-141P-201 | ENST00000459304 | 62 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SCARNA8-201 | ENST00000515924 | 131 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNA5SP446-201 | ENST00000515955 | 82 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNA5SP73-201 | ENST00000516744 | 108 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | PTP4A1-204 | ENST00000578299 | 135 nt | TSL 2 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MIR3158-1-201 | ENST00000583596 | 81 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | BX546450.2-201 | ENST00000602419 | 435 nt | TSL 5 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC024220.1-201 | ENST00000603675 | 484 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MIR92B-201 | ENST00000607575 | 96 nt | BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | C2orf91-203 | ENST00000615044 | 393 nt | APPRIS ALT2 TSL 5 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | HEPHL1-201 | ENST00000315765 | 5345 nt | APPRIS P1 TSL 5 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | ETV1-205 | ENST00000405192 | 4402 nt | TSL 1 (best) BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SLFN5-201 | ENST00000299977 | 10591 nt | APPRIS P1 TSL 1 (best) BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | CUL2-209 | ENST00000537177 | 4271 nt | TSL 5 BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SLC35A5-206 | ENST00000492406 | 4399 nt | APPRIS P1 TSL 1 (best) BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SOCS5-201 | ENST00000306503 | 4771 nt | APPRIS P1 TSL 1 (best) BASIC | 5.68 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SNHG14-215 | ENST00000551631 | 4008 nt | TSL 5 BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | PLCB1-211 | ENST00000617005 | 6458 nt | TSL 5 BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC110774.1-201 | ENST00000623567 | 2018 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | LATS1-201 | ENST00000253339 | 4256 nt | APPRIS P1 TSL 1 (best) BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | INPP4B-201 | ENST00000262992 | 3741 nt | APPRIS P1 TSL 5 BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SLC17A3-204 | ENST00000397060 | 2052 nt | APPRIS P1 TSL 2 BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU6-659P-201 | ENST00000516454 | 104 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU2-44P-201 | ENST00000516795 | 194 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU6-453P-201 | ENST00000516819 | 85 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | FTH1P11-201 | ENST00000517577 | 551 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RGS5-208 | ENST00000530507 | 851 nt | APPRIS ALT1 TSL 3 BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MIR4660-201 | ENST00000583549 | 74 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC091152.3-201 | ENST00000604227 | 325 nt | BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | DNAH5-201 | ENST00000265104 | 15633 nt | APPRIS P1 TSL 1 (best) BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | PMS1-215 | ENST00000447232 | 2576 nt | TSL 2 BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | ZNF92-204 | ENST00000450302 | 2957 nt | TSL 1 (best) BASIC | 5.67 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | LINC00504-201 | ENST00000505089 | 4672 nt | TSL 2 BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | VEPH1-203 | ENST00000392833 | 3979 nt | TSL 1 (best) BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RWDD2B-207 | ENST00000493196 | 3094 nt | APPRIS P1 TSL 1 (best) BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | AC018462.1-201 | ENST00000425966 | 1684 nt | TSL 1 (best) BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | EXPH5-201 | ENST00000265843 | 10187 nt | APPRIS P3 TSL 1 (best) BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SYTL2-203 | ENST00000359152 | 4123 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | ABCC9-204 | ENST00000538350 | 2672 nt | TSL 2 BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | SPART-201 | ENST00000355182 | 4820 nt | APPRIS P1 TSL 5 BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | RNU6-1048P-201 | ENST00000364054 | 107 nt | BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | Y_RNA.361-201 | ENST00000365515 | 120 nt | BASIC | 5.66 | □□□□□ -1.5 | | |
| NKX1-1 | Q15270 | MIR147B-201 | ENST00000390185 | 80 nt | BASIC | 5.66 | □□□□□ -1.5 | | |