Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.86□□□□□ -1.79
SSRP1Q08945 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.86□□□□□ -1.79
SSRP1Q08945 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.86□□□□□ -1.79
SSRP1Q08945 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.86□□□□□ -1.79
SSRP1Q08945 RPL23AP62-201ENST00000463396 453 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 RPL21P10-201ENST00000463521 490 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.86□□□□□ -1.79
SSRP1Q08945 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.86□□□□□ -1.79
SSRP1Q08945 MIR5701-3-201ENST00000578890 82 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 MIR4276-201ENST00000584832 70 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 MIR5701-1-201ENST00000585138 82 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 AC008737.2-201ENST00000599446 118 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 AL162713.1-201ENST00000604480 262 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 AL356157.2-201ENST00000605122 111 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 MIR5701-2-201ENST00000615634 82 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSRP1Q08945 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SSRP1Q08945 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SSRP1Q08945 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSRP1Q08945 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSRP1Q08945 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.85□□□□□ -1.79
SSRP1Q08945 SNORA63.1-201ENST00000362493 131 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 Y_RNA.39-201ENST00000362620 98 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 Y_RNA.80-201ENST00000362996 102 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 RNU6-487P-201ENST00000365430 104 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 RNU6-700P-201ENST00000391043 107 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 AC093578.1-201ENST00000415219 368 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 SETP5-201ENST00000437270 562 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 AL031183.1-201ENST00000457667 207 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 RPL30P10-201ENST00000488148 337 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 RNU7-4P-201ENST00000516961 62 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 AC009812.2-201ENST00000517657 457 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 GNAI2P1-201ENST00000541815 315 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 AC004584.2-201ENST00000570407 410 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 AC010653.1-201ENST00000571108 881 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 MIR4680-201ENST00000580906 66 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 uc_338.1-201ENST00000612113 180 ntBASIC3.85□□□□□ -1.79
SSRP1Q08945 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.85□□□□□ -1.79
SSRP1Q08945 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SSRP1Q08945 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
SSRP1Q08945 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSRP1Q08945 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.84□□□□□ -1.79
SSRP1Q08945 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSRP1Q08945 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.84□□□□□ -1.79
SSRP1Q08945 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSRP1Q08945 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSRP1Q08945 TNPO1P3-201ENST00000436471 2662 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 RNA5SP119-201ENST00000362715 117 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 RNU1-140P-201ENST00000365040 165 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 MIR7-3-201ENST00000384898 110 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 MIR625-201ENST00000385047 85 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSRP1Q08945 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSRP1Q08945 RNU2-23P-201ENST00000410545 195 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 AC113618.1-201ENST00000416747 285 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 MTCYBP10-201ENST00000424905 650 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 PTGES3P4-201ENST00000426243 356 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.84□□□□□ -1.79
SSRP1Q08945 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.84□□□□□ -1.79
SSRP1Q08945 AL031659.1-201ENST00000447075 539 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.84□□□□□ -1.79
SSRP1Q08945 AL513124.1-201ENST00000450410 614 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.84□□□□□ -1.79
SSRP1Q08945 HMGN1P18-201ENST00000457642 277 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 RNU7-170P-201ENST00000459303 61 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 RPL7P49-201ENST00000471402 708 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 RPS4XP22-201ENST00000480755 780 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.84□□□□□ -1.79
SSRP1Q08945 CKS1BP7-201ENST00000522230 235 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 AC136443.5-201ENST00000603741 370 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 AC091152.3-201ENST00000604227 325 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.84□□□□□ -1.79
SSRP1Q08945 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.84□□□□□ -1.79
SSRP1Q08945 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SSRP1Q08945 AC005592.1-201ENST00000566527 1640 ntBASIC3.84□□□□□ -1.8
SSRP1Q08945 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSRP1Q08945 Z83843.1-201ENST00000604070 3685 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 RNU1-70P-201ENST00000362618 164 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 RNU1-33P-201ENST00000364249 162 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 RNU6-19P-201ENST00000384718 107 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSRP1Q08945 AC096649.2-201ENST00000416186 393 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 EIF1AXP1-201ENST00000419267 435 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 AC007098.1-201ENST00000420122 367 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.83□□□□□ -1.8
SSRP1Q08945 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.83□□□□□ -1.8
SSRP1Q08945 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.83□□□□□ -1.8
SSRP1Q08945 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.83□□□□□ -1.8
SSRP1Q08945 RN7SKP210-201ENST00000459176 261 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 AC107626.1-201ENST00000471084 183 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 AP001025.1-201ENST00000486139 332 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.83□□□□□ -1.8
SSRP1Q08945 RNU6-475P-201ENST00000516073 104 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 RNU4-77P-201ENST00000516692 156 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 RNU6-1137P-201ENST00000517073 99 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 RNU6-711P-201ENST00000517255 106 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 AL590705.4-201ENST00000532209 134 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms