Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL365338.1-201ENST00000422282 858 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
H3F3AP84243 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.85□□□□□ -2.27
H3F3AP84243 HSPE1P9-201ENST00000440046 311 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 AL022238.1-201ENST00000442557 355 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.85□□□□□ -2.27
H3F3AP84243 RPL39P29-201ENST00000447779 157 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 AC009646.1-201ENST00000510455 318 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
H3F3AP84243 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.85□□□□□ -2.27
H3F3AP84243 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.85□□□□□ -2.27
H3F3AP84243 AC022022.2-201ENST00000602989 360 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 AC005776.1-201ENST00000603164 290 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 AC092574.1-201ENST00000609771 420 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.85□□□□□ -2.27
H3F3AP84243 MIR8065-201ENST00000620577 100 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.85□□□□□ -2.27
H3F3AP84243 AC095038.3-201ENST00000634439 195 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
H3F3AP84243 AC099654.5-201ENST00000636479 350 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 LINC02555-201ENST00000563933 1951 ntBASIC0.85□□□□□ -2.27
H3F3AP84243 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.27
H3F3AP84243 RNU6-395P-201ENST00000365662 106 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 RNU6-1065P-201ENST00000384513 106 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AL357139.1-201ENST00000407792 426 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AL590556.1-201ENST00000423231 483 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 FTH1P12-201ENST00000432137 551 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 PGBD4P5-201ENST00000445958 426 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AC132479.1-201ENST00000449160 144 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AC108059.3-201ENST00000456388 214 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.84□□□□□ -2.27
H3F3AP84243 AL139824.2-201ENST00000458731 1095 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.84□□□□□ -2.27
H3F3AP84243 AC097473.1-201ENST00000508142 408 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 SNORA31.16-201ENST00000516773 139 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AP000907.2-201ENST00000530827 353 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.84□□□□□ -2.27
H3F3AP84243 MIR4781-201ENST00000585250 76 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AC130324.3-201ENST00000614165 542 ntBASIC0.84□□□□□ -2.27
H3F3AP84243 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
H3F3AP84243 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.83□□□□□ -2.28
H3F3AP84243 MIR1305-201ENST00000408300 86 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.83□□□□□ -2.28
H3F3AP84243 AL161935.2-201ENST00000414627 60 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 EBAG9P1-201ENST00000418955 543 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 EIF1P1-201ENST00000421436 341 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 AC013262.1-201ENST00000426710 252 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 CALM1P1-201ENST00000442082 433 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 MTCO1P27-201ENST00000448269 226 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 RPS27P1-201ENST00000450552 247 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 HSPE1P13-201ENST00000451143 297 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 OR2AQ1P-201ENST00000451972 200 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 AC093899.1-201ENST00000457984 376 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 RNA5SP102-201ENST00000516865 106 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 RNU6-677P-201ENST00000516914 101 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 RNA5SP490-201ENST00000517141 136 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.83□□□□□ -2.28
H3F3AP84243 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.83□□□□□ -2.28
H3F3AP84243 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
H3F3AP84243 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.83□□□□□ -2.28
H3F3AP84243 AC090578.1-201ENST00000604955 591 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 AL355472.4-201ENST00000610233 626 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 AC007792.1-201ENST00000623023 402 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
H3F3AP84243 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
H3F3AP84243 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
H3F3AP84243 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
H3F3AP84243 MTND5P35-201ENST00000557537 1720 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 AL589826.1-201ENST00000340697 249 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 MIR96-201ENST00000362288 78 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 SNORD3E-201ENST00000362899 217 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
H3F3AP84243 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.82□□□□□ -2.28
H3F3AP84243 SNORA75B-201ENST00000384053 137 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 RNU6-224P-201ENST00000384055 107 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 RNU6-72P-201ENST00000384285 79 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 RNU6-360P-201ENST00000390944 104 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 RNA5SP390-201ENST00000410191 113 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 RNU2-7P-201ENST00000410794 178 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 MTND4P3-201ENST00000417829 541 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.82□□□□□ -2.28
H3F3AP84243 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.82□□□□□ -2.28
H3F3AP84243 MTCO2P25-201ENST00000447065 681 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.82□□□□□ -2.28
H3F3AP84243 RPS27AP8-201ENST00000452665 445 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 AC114982.1-201ENST00000469402 321 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 AL163195.1-201ENST00000496941 348 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.82□□□□□ -2.28
H3F3AP84243 RNU6-1028P-201ENST00000517164 93 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.82□□□□□ -2.28
H3F3AP84243 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.82□□□□□ -2.28
H3F3AP84243 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 441 ms