Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC017083.3-201ENST00000609955 700 ntBASIC2.25□□□□□ -2.05
RIPK4P57078 AL365204.3-201ENST00000612448 685 ntBASIC2.25□□□□□ -2.05
RIPK4P57078 SCARNA17.4-201ENST00000614296 143 ntBASIC2.25□□□□□ -2.05
RIPK4P57078 AC007014.2-201ENST00000615581 479 ntBASIC2.25□□□□□ -2.05
RIPK4P57078 AL359757.2-201ENST00000624309 274 ntBASIC2.25□□□□□ -2.05
RIPK4P57078 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RIPK4P57078 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RIPK4P57078 RNU1-17P-201ENST00000363022 152 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 Y_RNA.256-201ENST00000364594 104 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 SMIM11P1-201ENST00000369586 178 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 RNU6-483P-201ENST00000384088 108 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 AL590002.1-201ENST00000406554 418 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 EIF1P1-201ENST00000421436 341 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 USP9YP18-201ENST00000425912 695 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 MICF-203ENST00000432679 129 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 AC092989.1-201ENST00000481235 277 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 RNU2-10P-201ENST00000516375 211 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 RNU6-1092P-201ENST00000516955 87 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 SNORA31.18-201ENST00000517043 134 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 AP001893.2-201ENST00000526949 202 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 AP003072.2-201ENST00000527756 676 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 AC136619.2-201ENST00000563361 631 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.24□□□□□ -2.05
RIPK4P57078 AC104581.2-201ENST00000572227 430 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.24□□□□□ -2.05
RIPK4P57078 AC024619.4-201ENST00000580924 316 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.24□□□□□ -2.05
RIPK4P57078 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
RIPK4P57078 AC093648.1-201ENST00000623546 606 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 MTND5P42-201ENST00000637720 498 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 MIR7515-201ENST00000637837 67 ntBASIC2.24□□□□□ -2.05
RIPK4P57078 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RIPK4P57078 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.23□□□□□ -2.05
RIPK4P57078 RNA5SP99-201ENST00000364020 114 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 Y_RNA.248-201ENST00000364501 109 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 Z98749.2-208ENST00000381646 500 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 Y_RNA.534-201ENST00000384599 112 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 MIR558-201ENST00000384920 94 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 MIR181A1-201ENST00000385026 110 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 RNU6-1158P-201ENST00000391167 107 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 RNU2-9P-201ENST00000410194 145 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 RPS12P24-201ENST00000412619 387 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AL356379.1-201ENST00000414105 126 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AL353729.1-201ENST00000425044 720 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 MTND3P21-201ENST00000433774 331 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AL596276.1-201ENST00000434465 418 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 BRK1P2-201ENST00000442875 223 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.23□□□□□ -2.05
RIPK4P57078 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.23□□□□□ -2.05
RIPK4P57078 RNU7-26P-201ENST00000458980 63 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 RNU6-953P-201ENST00000459154 107 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.23□□□□□ -2.05
RIPK4P57078 AC023194.1-201ENST00000493084 308 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.23□□□□□ -2.05
RIPK4P57078 AC084851.1-201ENST00000529105 249 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.23□□□□□ -2.05
RIPK4P57078 AC007151.1-201ENST00000572774 483 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.23□□□□□ -2.05
RIPK4P57078 MIR3117-201ENST00000584034 78 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AC010928.2-201ENST00000588017 287 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AC098848.2-201ENST00000588023 330 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.23□□□□□ -2.05
RIPK4P57078 AP002360.4-201ENST00000606980 481 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AC139792.3-201ENST00000623525 224 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 AC009161.2-201ENST00000624626 138 ntBASIC2.23□□□□□ -2.05
RIPK4P57078 ZNF680P1-201ENST00000436625 1469 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 Y_RNA.38-201ENST00000362617 102 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 SNORA38-201ENST00000363946 132 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 RNA5SP190-201ENST00000365222 118 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 RNU4-12P-201ENST00000365233 139 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 Y_RNA.367-201ENST00000365544 101 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 RNU6-108P-201ENST00000365558 107 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.22□□□□□ -2.05
RIPK4P57078 RNU6-606P-201ENST00000384721 111 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 RNU6-1328P-201ENST00000410938 106 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 MTATP6P18-201ENST00000417994 673 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.22□□□□□ -2.05
RIPK4P57078 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RIPK4P57078 AL591704.1-201ENST00000432574 275 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 GPR143P-201ENST00000434155 205 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 RBMX2P4-201ENST00000441256 376 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 AC069439.1-201ENST00000494739 167 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.22□□□□□ -2.05
RIPK4P57078 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
RIPK4P57078 AC011979.2-201ENST00000527568 352 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 AC104383.1-201ENST00000530297 370 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 OR5B19P-201ENST00000531766 928 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 AC006199.1-201ENST00000548728 219 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 MIR4255-201ENST00000579351 72 ntBASIC2.22□□□□□ -2.05
RIPK4P57078 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.22□□□□□ -2.05
RIPK4P57078 MIR3618-201ENST00000580330 88 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms