Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA1P56159 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.59□□□□□ -1.83
GFRA1P56159 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.59□□□□□ -1.83
GFRA1P56159 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.59□□□□□ -1.83
GFRA1P56159 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
GFRA1P56159 RNA5SP361-201ENST00000362686 118 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 Y_RNA.60-201ENST00000362831 98 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 SNORD81.1-201ENST00000363064 77 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 RNU5F-3P-201ENST00000363767 117 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 RNA5SP399-201ENST00000364003 117 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 RNU6-280P-201ENST00000364145 104 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 RNU1-64P-201ENST00000365443 163 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.59□□□□□ -1.83
GFRA1P56159 RNU6-213P-201ENST00000384051 104 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 Y_RNA.477-201ENST00000384352 108 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 Y_RNA.478-201ENST00000384358 107 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 U3.19-201ENST00000390893 196 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 RNA5SP213-201ENST00000391031 106 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 AL133475.1-201ENST00000404414 305 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 MIR548H3-201ENST00000408771 118 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 RNU6-1140P-201ENST00000410517 106 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 CYCSP48-201ENST00000417124 323 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.59□□□□□ -1.83
GFRA1P56159 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.59□□□□□ -1.83
GFRA1P56159 AC139712.2-201ENST00000424302 339 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.59□□□□□ -1.83
GFRA1P56159 HMGB1P37-201ENST00000439613 609 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 Z98949.2-201ENST00000440996 144 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.59□□□□□ -1.83
GFRA1P56159 AC090525.1-201ENST00000479116 478 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 AC146944.2-203ENST00000502493 354 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 AC107222.1-201ENST00000510899 637 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 AC139495.1-202ENST00000513164 354 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 Y_RNA.680-201ENST00000516441 93 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 RN7SKP49-201ENST00000516675 260 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 SNORA31.16-201ENST00000516773 139 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GFRA1P56159 UBL5P4-201ENST00000562584 236 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 AC025281.1-201ENST00000567026 265 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 SNORD98-201ENST00000636377 67 ntBASIC3.59□□□□□ -1.83
GFRA1P56159 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
GFRA1P56159 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
GFRA1P56159 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
GFRA1P56159 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
GFRA1P56159 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
GFRA1P56159 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
GFRA1P56159 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
GFRA1P56159 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
GFRA1P56159 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
GFRA1P56159 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.58□□□□□ -1.84
GFRA1P56159 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
GFRA1P56159 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GFRA1P56159 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
GFRA1P56159 MIR215-201ENST00000384858 110 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 MIR1251-201ENST00000408552 70 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 SNORA3C-201ENST00000408792 125 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 RN7SKP58-201ENST00000411010 305 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 MTND4LP30-201ENST00000454092 297 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.58□□□□□ -1.84
GFRA1P56159 GZMAP1-201ENST00000503054 631 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 AIG1P1-201ENST00000503376 148 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.58□□□□□ -1.84
GFRA1P56159 SNORA31.6-201ENST00000516241 130 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 RNA5SP179-201ENST00000517284 121 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 IGKV2-38-201ENST00000517443 247 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.58□□□□□ -1.84
GFRA1P56159 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.58□□□□□ -1.84
GFRA1P56159 AC091167.4-201ENST00000605079 184 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.58□□□□□ -1.84
GFRA1P56159 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
GFRA1P56159 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
GFRA1P56159 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
GFRA1P56159 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.58□□□□□ -1.84
GFRA1P56159 AC007256.1-201ENST00000392253 2765 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA1P56159 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.57□□□□□ -1.84
GFRA1P56159 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
GFRA1P56159 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
GFRA1P56159 AL391987.6-201ENST00000305671 199 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 snoU2_19.2-201ENST00000363024 80 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 SNORD114-19-201ENST00000363072 75 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 SNORD74.4-201ENST00000364129 80 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 RNU6-281P-201ENST00000384212 103 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 RNU6-937P-201ENST00000384325 106 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 MIR487A-201ENST00000385009 80 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GFRA1P56159 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GFRA1P56159 RNA5SP39-201ENST00000411245 120 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AC083863.1-201ENST00000438811 231 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.57□□□□□ -1.84
GFRA1P56159 AL031183.1-201ENST00000457667 207 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 HMGB1P35-201ENST00000503360 598 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AC025554.1-201ENST00000505641 188 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AC012433.1-201ENST00000588916 398 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AC012493.2-201ENST00000595083 291 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AL078605.1-201ENST00000603529 500 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AL442067.1-201ENST00000613261 223 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 AP001282.2-201ENST00000616149 309 ntBASIC3.57□□□□□ -1.84
GFRA1P56159 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms