Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCNKAP51800 MTND1P11-201ENST00000456661 876 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCNKAP51800 RPL23AP45-201ENST00000476406 468 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCNKAP51800 AC079140.5-201ENST00000507882 310 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC008526.1-201ENST00000509149 338 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 RN7SKP40-201ENST00000517211 242 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AP005639.2-201ENST00000527592 928 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 HPRT1P3-201ENST00000539521 576 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.75□□□□□ -1.97
CLCNKAP51800 RPS3AP23-202ENST00000574601 686 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCNKAP51800 FGF7P1-201ENST00000582820 288 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC008121.1-201ENST00000603244 268 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 ELOCP5-201ENST00000604924 333 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC087045.1-201ENST00000605856 382 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AL022345.1-201ENST00000607292 135 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 MIR6134-201ENST00000617606 109 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC010378.1-201ENST00000619270 362 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CLCNKAP51800 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.75□□□□□ -1.97
CLCNKAP51800 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CLCNKAP51800 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLCNKAP51800 AC092593.1-201ENST00000515413 1815 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 ADAM3A-203ENST00000461344 2157 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
CLCNKAP51800 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.74□□□□□ -1.97
CLCNKAP51800 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
CLCNKAP51800 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 MIR548F5-201ENST00000408421 86 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 SNORD56-201ENST00000413522 71 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCNKAP51800 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.74□□□□□ -1.97
CLCNKAP51800 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.74□□□□□ -1.97
CLCNKAP51800 AC092001.1-201ENST00000453012 261 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.74□□□□□ -1.97
CLCNKAP51800 AC092436.3-201ENST00000511788 257 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCNKAP51800 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 RNU6-581P-201ENST00000516214 105 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 RNU6-566P-201ENST00000516790 107 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 RNA5SP454-201ENST00000517231 127 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.74□□□□□ -1.97
CLCNKAP51800 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCNKAP51800 AC006199.1-201ENST00000548728 219 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.74□□□□□ -1.97
CLCNKAP51800 AL117336.2-201ENST00000602435 335 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.74□□□□□ -1.97
CLCNKAP51800 AL132765.2-201ENST00000610812 351 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 AC104237.2-201ENST00000612456 443 ntBASIC2.74□□□□□ -1.97
CLCNKAP51800 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.74□□□□□ -1.97
CLCNKAP51800 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLCNKAP51800 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CLCNKAP51800 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CLCNKAP51800 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.74□□□□□ -1.97
CLCNKAP51800 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLCNKAP51800 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
CLCNKAP51800 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 RNU6-562P-201ENST00000362731 107 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 SNORA5B-201ENST00000363786 132 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLCNKAP51800 SNORD116-11-201ENST00000383882 92 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AL360182.1-201ENST00000397433 468 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AL138827.1-201ENST00000402666 306 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 RAP1BP3-201ENST00000407180 549 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 U3.37-201ENST00000408528 213 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 RNA5SP21-201ENST00000410917 96 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AL096701.2-201ENST00000416920 238 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AC009414.1-201ENST00000427200 443 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.73□□□□□ -1.97
CLCNKAP51800 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
CLCNKAP51800 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.73□□□□□ -1.97
CLCNKAP51800 RN7SKP132-201ENST00000516001 208 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 Y_RNA.691-201ENST00000516611 103 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 SNORA31.18-201ENST00000517043 134 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.73□□□□□ -1.97
CLCNKAP51800 NACAP3-201ENST00000552100 481 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AL121821.2-201ENST00000556081 394 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AC021739.1-201ENST00000559631 174 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 MIR4790-201ENST00000577799 79 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AL121917.1-203ENST00000605534 577 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AC064836.2-201ENST00000609491 462 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.73□□□□□ -1.97
CLCNKAP51800 AC099654.5-201ENST00000636479 350 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLCNKAP51800 CDC27P3-201ENST00000635418 1910 ntBASIC2.73□□□□□ -1.97
CLCNKAP51800 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLCNKAP51800 AC108206.1-201ENST00000570186 4159 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLCNKAP51800 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
CLCNKAP51800 RPL9P7-201ENST00000330965 580 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 RNU1-100P-201ENST00000365255 165 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 RNU6-1329P-201ENST00000365664 107 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 RNU6-128P-201ENST00000383976 107 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 RNU6-214P-201ENST00000384130 107 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 RNU6-95P-201ENST00000384697 107 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms