Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 S100A11P2-201ENST00000467589 312 ntBASIC2.64□□□□□ -1.99
CLK1P49759 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.64□□□□□ -1.99
CLK1P49759 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.64□□□□□ -1.99
CLK1P49759 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 AC008526.1-201ENST00000509149 338 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 RNU6-864P-201ENST00000516256 108 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 ANP32BP3-201ENST00000559213 706 ntBASIC2.64□□□□□ -1.99
CLK1P49759 MTCO3P23-201ENST00000561363 289 ntBASIC2.64□□□□□ -1.99
CLK1P49759 CYCSP39-201ENST00000565821 309 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AC106782.4-201ENST00000568264 210 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AL355375.2-201ENST00000574825 175 ntBASIC2.64□□□□□ -1.99
CLK1P49759 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.64□□□□□ -1.99
CLK1P49759 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
CLK1P49759 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
CLK1P49759 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.64□□□□□ -1.99
CLK1P49759 AC174048.1-201ENST00000603389 144 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AC104763.2-201ENST00000604179 382 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AC093732.2-201ENST00000607950 274 ntBASIC2.64□□□□□ -1.99
CLK1P49759 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 AC090115.4-201ENST00000609970 188 ntBASIC2.64□□□□□ -1.99
CLK1P49759 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLK1P49759 MIR6840-201ENST00000611937 71 ntBASIC2.64□□□□□ -1.99
CLK1P49759 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
CLK1P49759 RMST_7.1-201ENST00000621935 268 ntBASIC2.64□□□□□ -1.99
CLK1P49759 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
CLK1P49759 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CLK1P49759 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
CLK1P49759 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLK1P49759 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLK1P49759 Y_RNA.58-201ENST00000362807 102 ntBASIC2.63□□□□□ -1.99
CLK1P49759 Y_RNA.154-201ENST00000363624 102 ntBASIC2.63□□□□□ -1.99
CLK1P49759 RNU6-82P-201ENST00000363970 107 ntBASIC2.63□□□□□ -1.99
CLK1P49759 RNU1-91P-201ENST00000364746 163 ntBASIC2.63□□□□□ -1.99
CLK1P49759 RNY3P1-201ENST00000365085 102 ntBASIC2.63□□□□□ -1.99
CLK1P49759 RNY3-201ENST00000365484 102 ntBASIC2.63□□□□□ -1.99
CLK1P49759 SNORA70.4-201ENST00000365509 134 ntBASIC2.63□□□□□ -1.99
CLK1P49759 Y_RNA.414-201ENST00000384011 101 ntBASIC2.63□□□□□ -1.99
CLK1P49759 RNU6-116P-201ENST00000384042 109 ntBASIC2.63□□□□□ -1.99
CLK1P49759 Y_RNA.490-201ENST00000384413 102 ntBASIC2.63□□□□□ -1.99
CLK1P49759 MIR592-201ENST00000384959 97 ntBASIC2.63□□□□□ -1.99
CLK1P49759 CISD1P1-201ENST00000393907 327 ntBASIC2.63□□□□□ -1.99
CLK1P49759 POLHP1-201ENST00000411806 470 ntBASIC2.63□□□□□ -1.99
CLK1P49759 RPS20P15-201ENST00000412792 311 ntBASIC2.63□□□□□ -1.99
CLK1P49759 USP9YP20-201ENST00000419224 558 ntBASIC2.63□□□□□ -1.99
CLK1P49759 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.63□□□□□ -1.99
CLK1P49759 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.63□□□□□ -1.99
CLK1P49759 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.63□□□□□ -1.99
CLK1P49759 SCARNA18-201ENST00000459004 134 ntBASIC2.63□□□□□ -1.99
CLK1P49759 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.63□□□□□ -1.99
CLK1P49759 RNA5SP341-201ENST00000516261 117 ntBASIC2.63□□□□□ -1.99
CLK1P49759 SNORA9.3-201ENST00000516383 129 ntBASIC2.63□□□□□ -1.99
CLK1P49759 Y_RNA.689-201ENST00000516589 107 ntBASIC2.63□□□□□ -1.99
CLK1P49759 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.63□□□□□ -1.99
CLK1P49759 AC090136.1-201ENST00000520009 240 ntBASIC2.63□□□□□ -1.99
CLK1P49759 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.63□□□□□ -1.99
CLK1P49759 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.63□□□□□ -1.99
CLK1P49759 MIR3942-201ENST00000585264 109 ntBASIC2.63□□□□□ -1.99
CLK1P49759 AC243960.4-201ENST00000600532 288 ntBASIC2.63□□□□□ -1.99
CLK1P49759 Z82243.1-201ENST00000609432 473 ntBASIC2.63□□□□□ -1.99
CLK1P49759 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.63□□□□□ -1.99
CLK1P49759 AC093913.1-201ENST00000614178 329 ntBASIC2.63□□□□□ -1.99
CLK1P49759 AC007742.2-201ENST00000618226 398 ntBASIC2.63□□□□□ -1.99
CLK1P49759 AC103705.1-201ENST00000619013 241 ntBASIC2.63□□□□□ -1.99
CLK1P49759 U6.99-201ENST00000637524 83 ntBASIC2.63□□□□□ -1.99
CLK1P49759 MIR1302-1-201ENST00000637932 143 ntBASIC2.63□□□□□ -1.99
CLK1P49759 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.63□□□□□ -1.99
CLK1P49759 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.63□□□□□ -1.99
CLK1P49759 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLK1P49759 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CLK1P49759 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CLK1P49759 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CLK1P49759 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLK1P49759 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLK1P49759 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLK1P49759 Y_RNA.394-201ENST00000383942 103 ntBASIC2.62□□□□□ -1.99
CLK1P49759 RNU6-1011P-201ENST00000384668 107 ntBASIC2.62□□□□□ -1.99
CLK1P49759 MIR144-201ENST00000384886 86 ntBASIC2.62□□□□□ -1.99
CLK1P49759 MIR512-1-201ENST00000384913 84 ntBASIC2.62□□□□□ -1.99
CLK1P49759 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.62□□□□□ -1.99
CLK1P49759 FABP5P13-201ENST00000452144 328 ntBASIC2.62□□□□□ -1.99
CLK1P49759 CYP2C59P-201ENST00000457790 269 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AP001324.2-201ENST00000461163 319 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.62□□□□□ -1.99
CLK1P49759 TBCAP3-201ENST00000512475 312 ntBASIC2.62□□□□□ -1.99
CLK1P49759 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
CLK1P49759 SNORA19.2-201ENST00000516013 114 ntBASIC2.62□□□□□ -1.99
CLK1P49759 SCARNA13-201ENST00000516672 275 ntBASIC2.62□□□□□ -1.99
CLK1P49759 RNU6-1153P-201ENST00000516760 105 ntBASIC2.62□□□□□ -1.99
CLK1P49759 RNU6-677P-201ENST00000516914 101 ntBASIC2.62□□□□□ -1.99
CLK1P49759 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.62□□□□□ -1.99
CLK1P49759 CBX3P7-201ENST00000532876 502 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AC090115.3-201ENST00000553218 849 ntBASIC2.62□□□□□ -1.99
CLK1P49759 BNIP3P22-201ENST00000593399 556 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms